Evidence map›Paper›PMID 30840760›Full record

ArticleJournal of experimental botany2019

Knockdown of glycine decarboxylase complex alters photorespiratory carbon isotope fractionation in Oryza sativa leaves.

Rita Giuliani, Shanta Karki, Sarah Covshoff, Hsiang-Chun Lin, Robert A Coe, Nuria K Koteyeva, W Paul Quick, Susanne Von Caemmerer, Robert T Furbank, Julian M Hibberd and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 17 citations in OpenAlex.

  1. Photosynthesis: Genetic Strategies Adopted to Gain Higher Efficiency.International journal of molecular sciences · 2024
    Review
  2. Review
  3. HPlant molecular biology · 2021
    Article
  4. Low Salinity Improves Photosynthetic Performance inFrontiers in plant science · 2020
    Article
  5. A Partial CFrontiers in plant science · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 5 countries.

Rita GiulianiSchool of Biological Sciences, Molecular Plant Sciences, Washington State University, Pullman, WA, USA.
Shanta KarkiC4 Rice Center, International Rice Research Institute (IRRI), Los Baños, Philippines.
Sarah CovshoffDepartment of Plant Sciences, University of Cambridge, Cambridge, UK.
Hsiang-Chun LinC4 Rice Center, International Rice Research Institute (IRRI), Los Baños, Philippines.
Robert A CoeC4 Rice Center, International Rice Research Institute (IRRI), Los Baños, Philippines.
Nuria K KoteyevaLaboratory of Anatomy and Morphology, V.L. Komarov Botanical Institute of the Russian Academy of Sciences, St. Petersburg, Russia.
W Paul QuickC4 Rice Center, International Rice Research Institute (IRRI), Los Baños, Philippines.
Susanne Von CaemmererDivision of Plant Sciences, Research School of Biology, The Australian National University, Canberra, Australia.
Robert T FurbankDivision of Plant Sciences, Research School of Biology, The Australian National University, Canberra, Australia.
Julian M HibberdDepartment of Plant Sciences, University of Cambridge, Cambridge, UK.
Gerald E EdwardsSchool of Biological Sciences, Molecular Plant Sciences, Washington State University, Pullman, WA, USA.
Asaph B CousinsSchool of Biological Sciences, Molecular Plant Sciences, Washington State University, Pullman, WA, USA.
International Rice Research Institute · PHWashington State University · USAustralian National University · AUUniversity of Cambridge · GBRussian Academy of Sciences · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The influence of reduced glycine decarboxylase complex (GDC) activity on leaf atmosphere CO2 and 13CO2 exchange was tested in transgenic Oryza sativa with the GDC H-subunit knocked down in leaf mesophyll cells. Leaf measurements on transgenic gdch knockdown and wild-type plants were carried out in the light under photorespiratory and low photorespiratory conditions (i.e. 18.4 kPa and 1.84 kPa atmospheric O2 partial pressure, respectively), and in the dark. Under approximately current ambient O2 partial pressure (18.4 kPa pO2), the gdch knockdown plants showed an expected photorespiratory-deficient phenotype, with lower leaf net CO2 assimilation rates (A) than the wild-type. Additionally, under these conditions, the gdch knockdown plants had greater leaf net discrimination against 13CO2 (Δo) than the wild-type. This difference in Δo was in part due to lower 13C photorespiratory fractionation (f) ascribed to alternative decarboxylation of photorespiratory intermediates. Furthermore, the leaf dark respiration rate (Rd) was enhanced and the 13CO2 composition of respired CO2 (δ13CRd) showed a tendency to be more depleted in the gdch knockdown plants. These changes in Rd and δ13CRd were due to the amount and carbon isotopic composition of substrates available for dark respiration. These results demonstrate that impairment of the photorespiratory pathway affects leaf 13CO2 exchange, particularly the 13C decarboxylation fractionation associated with photorespiration.

Indexed as

PhotosynthesisCarbon IsotopesCell RespirationGlycine Decarboxylase ComplexOryzaPlant LeavesPlant ProteinsCarbon-13Carbon IsotopesGlycine Decarboxylase ComplexPlant Proteins13C discriminationC4 photosynthesisCO2 exchangeGDC knockdownleaf dark respirationphotorespirationrice

Identifiers

PMID30840760
PMCPMC6506765
OpenAlexW2921047432

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.