Evidence map›Paper›PMID 30840628›Full record

ArticlePloS one2019

A paper-based, cell-free biosensor system for the detection of heavy metals and date rape drugs.

Alexander Gräwe, Anna Dreyer, Tobias Vornholt, Ursela Barteczko, Luzia Buchholz, Gila Drews, Uyen Linh Ho, Marta Eva Jackowski, Melissa Kracht, Janina Lüders and 7 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 112 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Alexander GräweCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.
Anna DreyerCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.
Tobias VornholtCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.
Ursela BarteczkoCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.
Luzia BuchholzCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.
Gila DrewsCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.
Uyen Linh HoCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.
Marta Eva JackowskiCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.
Melissa KrachtCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.
Janina LüdersCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.ORCID 0000-0002-3761-1679
Tore BleckwehlCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.ORCID 0000-0003-1116-0512
Lukas RositzkaCellular and Molecular Biotechnology, Faculty of Technology, Bielefeld University, Bielefeld, Germany.
Matthias RuweCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.
Manuel WittchenCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.
Petra LutterFaculty of Biology, Mathematical Methods in Systems Biology, Proteome and Metabolome Research, Bielefeld University, Bielefeld, Germany.
Kristian MüllerCellular and Molecular Biotechnology, Faculty of Technology, Bielefeld University, Bielefeld, Germany.
Jörn KalinowskiCenter for Biotechnology (CeBiTec), Microbial Genomics and Biotechnology, Bielefeld University, Bielefeld, Germany.
Bielefeld University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biosensors have emerged as a valuable tool with high specificity and sensitivity for fast and reliable detection of hazardous substances in drinking water. Numerous substances have been addressed using synthetic biology approaches. However, many proposed biosensors are based on living, genetically modified organisms and are therefore limited in shelf life, usability and biosafety. We addressed these issues by the construction of an extensible, cell-free biosensor. Storage is possible through freeze drying on paper. Following the addition of an aqueous sample, a highly efficient cell-free protein synthesis (CFPS) reaction is initiated. Specific allosteric transcription factors modulate the expression of 'superfolder' green fluorescent protein (sfGFP) depending on the presence of the substance of interest. The resulting fluorescence intensities are analyzed with a conventional smartphone accompanied by simple and cheap light filters. An ordinary differential equitation (ODE) model of the biosensors was developed, which enabled prediction and optimization of performance. With an optimized cell-free biosensor based on the Shigella flexneri MerR transcriptional activator, detection of 6 μg/L Hg(II) ions in water was achieved. Furthermore, a completely new biosensor for the detection of gamma-hydroxybutyrate (GHB), a substance used as date-rape drug, was established by employing the naturally occurring transcriptional repressor BlcR from Agrobacterium tumefaciens.

Indexed as

Biosensing TechniquesCell-Free SystemGreen Fluorescent ProteinsHumansHydroxybutyratesIllicit DrugsMetals, HeavyRapeSubstance Abuse DetectionWater Pollutants, ChemicalGreen Fluorescent ProteinsHydroxybutyratesIllicit DrugsMetals, HeavyWater Pollutants, Chemical

Identifiers

PMID30840628
PMCPMC6402643
OpenAlexW2921736495

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.