Evidence map›Paper›PMID 30839742›Full record

ArticleRoyal Society open science2018

The role of geospatial hotspots in the spatial spread of tuberculosis in rural Ethiopia: a mathematical model.

Debebe Shaweno, James M Trauer, Justin T Denholm, Emma S McBryde

Abstract read
In one paragraph

Article in Royal Society open science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Spatial scale of tuberculosis transmission in Lima, Peru.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Spatiotemporal Patterns of Tuberculosis in Hunan Province, China.International journal of environmental research and public health · 2021
    Article
  11. Article
  12. The Importance of Heterogeneity to the Epidemiology of Tuberculosis.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2019
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Debebe ShawenoDepartment of Medicine, University of Melbourne, Melbourne, Victoria, Australia.ORCID 0000-0001-9596-5443
James M TrauerDepartment of Medicine, University of Melbourne, Melbourne, Victoria, Australia.
Justin T DenholmDepartment of Microbiology and Immunology, University of Melbourne, Melbourne, Victoria, Australia.
Emma S McBrydeDepartment of Medicine, University of Melbourne, Melbourne, Victoria, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Geospatial tuberculosis (TB) hotspots are hubs of TB transmission both within and across community groups. We aimed to quantify the extent to which these hotspots account for the spatial spread of TB in a high-burden setting. We developed spatially coupled models to quantify the spread of TB from geographical hotspots to distant regions in rural Ethiopia. The population was divided into three 'patches' based on their proximity to transmission hotspots, namely hotspots, adjacent regions and remote regions. The models were fitted to 5-year notification data aggregated by the metapopulation structure. Model fitting was achieved with a Metropolis-Hastings algorithm using a Poisson likelihood to compare model-estimated notification rate with observed notification rates. A cross-coupled metapopulation model with assortative mixing by region closely fit to notification data as assessed by the deviance information criterion. We estimated 45 hotspot-to-adjacent regions transmission events and 2 hotspot-to-remote regions transmission events occurred for every 1000 hotspot-to-hotspot transmission events. Although the degree of spatial coupling was weak, the proportion of infections in the adjacent region that resulted from mixing with hotspots was high due to the high prevalence of TB cases in a hotspot region, with approximately 75% of infections attributable to hotspot contact. Our results suggest that the role of hotspots in the geospatial spread of TB in rural Ethiopia is limited, implying that TB transmission is primarily locally driven.

Indexed as

hotspotsmetapopulation modelsspatial analysistransmissiontuberculosis

Identifiers

PMID30839742
PMCPMC6170575

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.