Evidence map›Paper›PMID 30838450›Full record

ArticleHuman genetics2019

Targeted panel sequencing establishes the implication of planar cell polarity pathway and involves new candidate genes in neural tube defect disorders.

Marie Beaumont, Linda Akloul, Wilfrid Carré, Chloé Quélin, Hubert Journel, Laurent Pasquier, Mélanie Fradin, Sylvie Odent, Houda Hamdi-Rozé, Erwan Watrin and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Identification of new candidate genes for spina bifida through exome sequencing.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2021
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Review
  14. Genetic Markers of Spina Bifida in an Indian Cohort.Journal of Indian Association of Pediatric Surgeons
    Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Marie BeaumontService de Génétique Moléculaire et Génomique, CHU Pontchaillou, 2 rue Henri le Guilloux, 35033, Rennes, France.
Linda AkloulService de Génétique Clinique, CHU Hôpital sud, 16 avenue de Bulgarie, 35200, Rennes, France.
Wilfrid CarréService de Génétique Moléculaire et Génomique, CHU Pontchaillou, 2 rue Henri le Guilloux, 35033, Rennes, France.
Chloé QuélinService de Génétique Clinique, CHU Hôpital sud, 16 avenue de Bulgarie, 35200, Rennes, France.
Hubert JournelService de Génétique, CH Bretagne Atlantique, 20 Bd du Général Guillaudot, 56017, Vannes, France.
Laurent PasquierService de Génétique Clinique, CHU Hôpital sud, 16 avenue de Bulgarie, 35200, Rennes, France.
Mélanie FradinService de Génétique Clinique, CHU Hôpital sud, 16 avenue de Bulgarie, 35200, Rennes, France.
Sylvie OdentService de Génétique Clinique, CHU Hôpital sud, 16 avenue de Bulgarie, 35200, Rennes, France.
Houda Hamdi-RozéService de Génétique Moléculaire et Génomique, CHU Pontchaillou, 2 rue Henri le Guilloux, 35033, Rennes, France.
Erwan WatrinUMR6290 CNRS, IGDR, Univ Rennes, 2 Avenue du Pr Léon Bernard, 35033, Rennes, France.
Valérie DupéUMR6290 CNRS, IGDR, Univ Rennes, 2 Avenue du Pr Léon Bernard, 35033, Rennes, France.
Christèle DubourgService de Génétique Moléculaire et Génomique, CHU Pontchaillou, 2 rue Henri le Guilloux, 35033, Rennes, France.
Véronique DavidService de Génétique Moléculaire et Génomique, CHU Pontchaillou, 2 rue Henri le Guilloux, 35033, Rennes, France. veronique.david@univ-rennes1.fr.ORCID http://orcid.org/0000-0003-1489-1345

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neural tube defect disorders are developmental diseases that originate from an incomplete closure of the neural tube during embryogenesis. Despite high prevalence-1 out of 3000 live births-their etiology is not yet established and both environmental and genetic factors have been proposed, with a heritability rate of about 60%. Studies in mouse models as well as in human have further suggested a multifactorial pattern of inheritance for neural tube defect disorders. Here, we report results obtained from clinical diagnosis and NGS analysis of a cohort composed of 52 patients. Using a candidate gene panel approach, we identified variants in known genes of planar cell polarity (PCP) pathway, although with higher prevalence than previously reported. Our study also reveals variants in novel genes such as FREM2 and DISP1. Altogether, these results confirm the implication of the PCP genes and involve the FRAS/FREM2 complex and Sonic Hedgehog signaling as novel components in the appearance of NTDs.

Indexed as

AdultAnimalsCell PolarityChildCohort StudiesDisease Models, AnimalDNA Mutational AnalysisFemaleGenetic Association StudiesHumansMaleMiceNeural Tube DefectsPregnancySequence Analysis, DNASignal Transduction

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.