Evidence map›Paper›PMID 30838212›Full record

ArticleFrontiers in molecular biosciences2019

Alternative Splicing of MXD3 and Its Regulation of MXD3 Levels in Glioblastoma.

Tin Ngo, Abraham Corrales, Traci Bourne, Samir Elmojahid, Kit S Lam, Elva Díaz

Open access · goldAbstract read
In one paragraph

Article in Frontiers in molecular biosciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. RNA biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Tin NgoDepartment of Pharmacology, University of California Davis School of Medicine, Davis, CA, United States.
Abraham CorralesDepartment of Pharmacology, University of California Davis School of Medicine, Davis, CA, United States.
Traci BourneDepartment of Pharmacology, University of California Davis School of Medicine, Davis, CA, United States.
Samir ElmojahidDepartment of Pharmacology, University of California Davis School of Medicine, Davis, CA, United States.
Kit S LamDepartment of Biochemistry and Molecular Medicine, University of California Davis School of Medicine, Davis, CA, United States.
Elva DíazDepartment of Pharmacology, University of California Davis School of Medicine, Davis, CA, United States.
University of California, Davis · US

Funding

Staff InvestigatorsP30CA093373 · NCI · UNIVERSITY OF CALIFORNIA DAVIS · PI Gina M Dayton · 2002 to 2026
$84.9M
Generation of tumor stem cell lines for directed therapeutics of brain cancerDP2OD006479 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI DIAZ, ELVA D · 2009 to 2009
$2.3M
NCI NIH HHS P30 CA093373NIH HHS DP2 OD006479
6 · The paper itself

Abstract

The transcription factor MXD3 is an atypical member of the MYC/MAX/MXD transcriptional network and has been previously shown to be an important regulator of cell proliferation. MXD3 has been shown to be overexpressed and to be required for medulloblastoma and acute lymphoblastic leukemia cell proliferation. In this study we leveraged datasets from The Cancer Genome Atlas to examine MXD3 across several cancers. We find that MXD3 transcripts are significantly overexpressed in ~72% of the available datasets. The gene itself is not frequently altered, while the promoter appears to be hypomethylated. We examine the possibility that aberrant regulation of the MXD3 message is the cause of abnormal MXD3 expression across cancers. Specifically, we looked at MXD3 alternative splicing in glioblastoma multiforme (GBM) and find notable functional differences between the splice variants. The 3'UTR confers differential message stability. Furthermore, the different coding sequences lead to different protein stabilities and localizations. Altogether, these data extend our knowledge of MXD3 in the context of human cancers while characterizing a previously unstudied splice variant of MXD3.

Indexed as

alternative splicingglioblastomaMXD3MYC/MAX/MXD networkThe Cancer Genome Atlas (TCGA)

Identifiers

PMID30838212
PMCPMC6390498
OpenAlexW2916154903

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.