Evidence map›Paper›PMID 30838037›Full record

ArticleFrontiers in genetics2019

Precise and Rapid Validation of Candidate Gene by Allele Specific Knockout With CRISPR/Cas9 in Wild Mice.

Tianzhu Chao, Zhuangzhuang Liu, Yu Zhang, Lichen Zhang, Rong Huang, Le He, Yanrong Gu, Zhijun Chen, Qianqian Zheng, Lijin Shi and 7 more

Abstract read
In one paragraph

Article in Frontiers in genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Tianzhu ChaoInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Zhuangzhuang LiuInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Yu ZhangInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Lichen ZhangInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Rong HuangInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Le HeInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Yanrong GuInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Zhijun ChenInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Qianqian ZhengInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Lijin ShiInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Wenping ZhengInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Xinhui QiInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Eryan KongInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Zhongjian ZhangInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Toby LawrenceCentre for Inflammation Biology and Cancer Immunology, King's College London, London, United Kingdom.
Yinming LiangInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.
Liaoxun LuInstitute of Psychiatry and Neuroscience, Xinxiang Medical University, Xinxiang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is a tempting goal to identify causative genes underlying phenotypic differences among inbred strains of mice, which is a huge reservoir of genetic resources to understand mammalian pathophysiology. In particular, the wild-derived mouse strains harbor enormous genetic variations that have been acquired during evolutionary divergence over 100s of 1000s of years. However, validating the genetic variation in non-classical strains was extremely difficult, until the advent of CRISPR/Cas9 genome editing tools. In this study, we first describe a T cell phenotype in both wild-derived PWD/PhJ parental mice and F1 hybrids, from a cross to C57BL/6 (B6) mice, and we isolate a genetic locus on Chr2, using linkage mapping and chromosome substitution mice. Importantly, we validate the identification of the functional gene controlling this T cell phenotype,

Indexed as

allele specific knockoutCD44CRISPR/Cas9functional genomicswild mice

Identifiers

PMID30838037
PMCPMC6390232

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.