Evidence map›Paper›PMID 30836863›Full record

ArticleRNA biology2019

Alternative splicing regulation of doublesex gene by RNA-binding proteins in the silkworm Bombyx mori.

Zeng-Zhang Zheng, Xia Sun, Bei Zhang, Jia Pu, Ze-Yu Jiang, Muwang Li, Yu-Jie Fan, Yong-Zhen Xu

Abstract read
In one paragraph

Article in RNA biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Evolution of sexual development and sexual dimorphism in insects.Current opinion in genetics & development · 2021
    Review
  11. Long Non-Coding RNAs in Insects.Animals : an open access journal from MDPI · 2021
    Review
  12. Article
  13. Review
  14. Article
  15. Spliceosomal Protein GeneInternational journal of molecular sciences · 2020
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zeng-Zhang Zhenga Key Laboratory of Insect Developmental and Evolutionary Biology, CAS Center for Excellence in Molecular Plant Science , Institute of Plant Physiology and Ecology, Chinese Academy of Sciences , Shanghai , China.
Xia Sunb College of Life Technology , Jiangsu University of Science and Technology , Zhenjiang , China.
Bei Zhanga Key Laboratory of Insect Developmental and Evolutionary Biology, CAS Center for Excellence in Molecular Plant Science , Institute of Plant Physiology and Ecology, Chinese Academy of Sciences , Shanghai , China.
Jia Pua Key Laboratory of Insect Developmental and Evolutionary Biology, CAS Center for Excellence in Molecular Plant Science , Institute of Plant Physiology and Ecology, Chinese Academy of Sciences , Shanghai , China.
Ze-Yu Jianga Key Laboratory of Insect Developmental and Evolutionary Biology, CAS Center for Excellence in Molecular Plant Science , Institute of Plant Physiology and Ecology, Chinese Academy of Sciences , Shanghai , China.
Muwang Lib College of Life Technology , Jiangsu University of Science and Technology , Zhenjiang , China.
Yu-Jie Fanc College of Life Science , Wuhan University , Wuhan , China.
Yong-Zhen Xuc College of Life Science , Wuhan University , Wuhan , China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Doublesex is highly conserved and sex-specifically spliced in insect sex-determination pathways, and its alternative splicing (AS) is regulated by Transformer, an exonic splicing activator, in the model system of Drosophila melanogaster. However, due to the lack of a transformer gene, AS regulation of doublesex remains unclear in Lepidoptera, which contain the economically important silkworm Bombyx mori and thousands of agricultural pests. Here, we use yeast three-hybrid system to screen for RNA-binding proteins that recognize sex-specific exons 3 and 4 of silkworm doublesex (Bm-dsx); this approach identified BxRBP1/Lark binding to the exon 3, and BxRBP2/TBPH and BxRBP3/Aret binding to the exon 4. Investigation of tissues shows that BxRBP1 and BxRBP2 have no sex specificity, but BxRBP3 has - three of its four isoforms are expressed with a sex-bias. Using novel sex-specific silkworm cell lines, we find that BxRBP1 and BxRBP3 directly interact with each other, and cooperatively function as splicing repressors. Over-expression of BxRBP1 and BxRBP3 isoforms efficiently inhibits splicing of the exons 3 and 4 in the female-specific cells and generates the male-specific isoform of Bm-dsx. We also demonstrate that the sex-determination upstream gene Masc regulates alternatively transcribed BxRBP3 isoforms. Thus, we identify a new regulatory mechanism of doublesex AS in the silkworm, revealing an evolutionary divergence in insect sex-determination.

Indexed as

Alternative SplicingAnimalsBombyxDNA-Binding ProteinsExonsFemaleGenes, InsectInsect ProteinsMaleNuclear Localization SignalsRNA-Binding ProteinsRNA, MessengerSex CharacteristicsTranscription, GeneticDNA-Binding ProteinsInsect ProteinsNuclear Localization SignalsRNA-Binding ProteinsRNA, MessengerAlternative splicingRNA-binding proteinsex determinationsilkworm

Identifiers

PMID30836863
PMCPMC6546364

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.