Evidence map›Paper›PMID 30834380›Full record

ArticleMicrobiology resource announcements2019

Closed Genome Sequences of Clinical Neisseria gonorrhoeae Strains Obtained from Combined Oxford Nanopore and Illumina Sequencing.

Richard C White, Manolito Torralba, Kelly Colt, Frank Harrison, Karrie Goglin, Kevin Nguyen, Roshan D'Souza, Claire C Bristow, Olivia Ellis, Olusegun O Soge and 2 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbiology resource announcements, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Richard C WhiteJ. Craig Venter Institute, Rockville, Maryland, USA.
Manolito TorralbaJ. Craig Venter Institute, La Jolla, California, USA.
Kelly ColtJ. Craig Venter Institute, La Jolla, California, USA.
Frank HarrisonJ. Craig Venter Institute, La Jolla, California, USA.
Karrie GoglinJ. Craig Venter Institute, La Jolla, California, USA.
Kevin NguyenJ. Craig Venter Institute, Rockville, Maryland, USA.
Roshan D'SouzaJ. Craig Venter Institute, Rockville, Maryland, USA.
Claire C BristowDivision of Infectious Diseases and Global Public Health, Department of Medicine, University of California, San Diego, California, USA.
Olivia EllisDepartment of Environmental Health Sciences, Fielding School of Public Health, University of California, Los Angeles, California, USA.
Olusegun O SogeDepartment of Global Health, University of Washington, Seattle, Washington, USA.
Jeffrey D KlausnerDivision of Infectious Diseases, Department of Medicine, University of California, Los Angeles, California, USA.
Derrick E FoutsJ. Craig Venter Institute, Rockville, Maryland, USA.ORCID https://orcid.org/0000-0003-4323-7668

Funding

The J. Craig Venter Institute Genome Center for Infectious DiseasesU19AI110819 · NIAID · J. CRAIG VENTER INSTITUTE, INC. · PI TAN, GENE · 2014 to 2018
$29.7M
NIAID NIH HHS U19 AI110819
6 · The paper itself

Abstract

Neisseria gonorrhoeae is the etiological agent of gonorrhea, the second most common notifiable disease in the United States. Here, we used a hybrid approach combining Oxford Nanopore Technologies MinION and Illumina MiSeq sequencing data to obtain closed genome sequences of nine clinical N. gonorrhoeae isolates.

Identifiers

PMID30834380
PMCPMC6395865

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.