Evidence map›Paper›PMID 30834329›Full record

ArticlemSystems

Comparative Genome Analysis of an Extensively Drug-Resistant Isolate of Avian Sequence Type 167

Xiancheng Zeng, Xuelin Chi, Brian T Ho, Damee Moon, Christine Lambert, Richard J Hall, Primo Baybayan, Shihua Wang, Brenda A Wilson, Mengfei Ho

Open access · goldAbstract read
In one paragraph

Article in mSystems. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Multidrug-resistantHeliyon · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Surveillance of OXA-244-producingEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2020
    Article
  14. Article
  15. Type VI Secretion System in PathogenicFrontiers in microbiology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Xiancheng ZengKey Laboratory of Fujian-Taiwan Animal Pathogen Biology, College of Animal Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Xuelin ChiKey Laboratory of Fujian-Taiwan Animal Pathogen Biology, College of Animal Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Brian T HoDepartment of Microbiology and Molecular Genetics, Harvard Medical School, Boston, Massachusetts, USA.
Damee MoonDepartment of Microbiology, School of Molecular and Cellular Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Christine LambertPacific Biosciences, Menlo Park, California, USA.
Richard J HallPacific Biosciences, Menlo Park, California, USA.
Primo BaybayanPacific Biosciences, Menlo Park, California, USA.
Shihua WangCollege of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Brenda A WilsonDepartment of Microbiology, School of Molecular and Cellular Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Mengfei HoCollege of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Fujian Agriculture and Forestry University · CNPacific Biosciences (United States) · USUniversity of Illinois Urbana-Champaign · USHarvard University · US

Funding

Pasteurella multocida toxin: Structure and ActivityR01AI038396 · NIAID · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI WILSON, BRENDA A. · 2004 to 2008
$1.7M
NIAID NIH HHS R01 AI038396
6 · The paper itself

Abstract

Extensive drug resistance (XDR) is an escalating global problem. Escherichia coli strain Sanji was isolated from an outbreak of pheasant colibacillosis in Fujian province, China, in 2011. This strain has XDR properties, exhibiting sensitivity to carbapenems but no other classes of known antibiotics. Whole-genome sequencing revealed a total of 32 known antibiotic resistance genes, many associated with insertion sequence 26 (IS

Indexed as

antibiotic resistancecapsular polysaccharideextensively drug resistantgenome comparisoninsertion sequenceO-antigenpathogen evolutionplasmid-mediated resistanceprophagesecretion systems

Identifiers

PMID30834329
PMCPMC6392093
OpenAlexW2916356353

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.