Evidence map›Paper›PMID 30833417›Full record

ArticleCold Spring Harbor molecular case studies2019

Base excision repair deficiency signatures implicate germline and somatic

My Linh Thibodeau, Eric Y Zhao, Caralyn Reisle, Carolyn Ch'ng, Hui-Li Wong, Yaoqing Shen, Martin R Jones, Howard J Lim, Sean Young, Carol Cremin and 29 more

Open access · diamondAbstract readCase Reports
In one paragraph

Article in Cold Spring Harbor molecular case studies, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Pan-Cancer Interrogation ofJCO precision oncology · 2024
    Article
  7. Article
  8. Association of base excision repair pathway genesInternational journal of occupational medicine and environmental health · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Classification of the canonical splice alterationCold Spring Harbor molecular case studies · 2022
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

39 authors at 4 institutions in 2 countries.

My Linh ThibodeauDepartment of Medical Genetics, University of British Columbia, Vancouver, British Columbia V6H 3N1, Canada.ORCID 0000-0002-2600-1197
Eric Y ZhaoCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.ORCID 0000-0003-1277-6335
Caralyn ReisleCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Carolyn Ch'ngCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.ORCID 0000-0003-0323-4243
Hui-Li WongDepartment of Medical Oncology, BC Cancer, Vancouver, British Columbia V5Z 4E6, Canada.
Yaoqing ShenCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Martin R JonesCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Howard J LimDepartment of Medical Oncology, BC Cancer, Vancouver, British Columbia V5Z 4E6, Canada.
Sean YoungDepartment of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V6T 2B5, Canada.
Carol CreminHereditary Cancer Program, BC Cancer, Vancouver, British Columbia V5Z 1H5, Canada.
Erin PleasanceCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Wei ZhangCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Robert HoltDepartment of Medical Genetics, University of British Columbia, Vancouver, British Columbia V6H 3N1, Canada.
Peter EirewDepartment of Molecular Oncology, BC Cancer, Vancouver, British Columbia V5Z 1L3, Canada.
Joanna KarasinskaPancreas Centre BC, Vancouver, British Columbia V5Z 1L8, Canada.
Steve E KallogerPancreas Centre BC, Vancouver, British Columbia V5Z 1L8, Canada.
Greg TaylorCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Elisa MajounieCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Melika BonakdarCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Zusheng ZongCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Dustin BleileCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Readman ChiuCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Inanc BirolDepartment of Medical Genetics, University of British Columbia, Vancouver, British Columbia V6H 3N1, Canada.
Karen GelmonDepartment of Medical Oncology, BC Cancer, Vancouver, British Columbia V5Z 4E6, Canada.
Caroline LohrischDepartment of Medical Oncology, BC Cancer, Vancouver, British Columbia V5Z 4E6, Canada.
Karen L MungallCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Andrew J MungallCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.ORCID 0000-0002-0905-2742
Richard MooreCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Yussanne P MaCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Alexandra FokCanada's Michael Smith Genome Sciences Centre, BC Cancer, Vancouver, British Columbia V5Z 4S6, Canada.
Stephen YipCancer Genetics and Genomics Laboratory, BC Cancer, Vancouver, British Columbia V5Z 4E6, Canada.
Aly KarsanDepartment of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V6T 2B5, Canada.
David HuntsmanDepartment of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V6T 2B5, Canada.
David F SchaefferDepartment of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V6T 2B5, Canada.
Janessa LaskinDepartment of Medical Oncology, BC Cancer, Vancouver, British Columbia V5Z 4E6, Canada.
Marco A MarraDepartment of Medical Genetics, University of British Columbia, Vancouver, British Columbia V6H 3N1, Canada.
Daniel J Renouf *Department of Medical Oncology, BC Cancer, Vancouver, British Columbia V5Z 4E6, Canada.
Steven J M Jones *Department of Medical Genetics, University of British Columbia, Vancouver, British Columbia V6H 3N1, Canada.
Kasmintan A Schrader *Department of Medical Genetics, University of British Columbia, Vancouver, British Columbia V6H 3N1, Canada.
Canada's Michael Smith Genome Sciences Centre · CABC Cancer Agency · CAUniversity of British Columbia · CAPancreas Centre (Canada) · CA

Funding

CIHR
6 · The paper itself

Abstract

We report a case of early-onset pancreatic ductal adenocarcinoma in a patient harboring biallelic

Indexed as

MutationAge of OnsetBreast NeoplasmsCarcinoma, Pancreatic DuctalDNA GlycosylasesFemaleGerm-Line MutationHumansLoss of HeterozygosityMiddle AgedPancreatic NeoplasmsProto-Oncogene Proteins p21(ras)DNA GlycosylasesKRAS protein, humanmutY adenine glycosylaseProto-Oncogene Proteins p21(ras)neoplasm of the breastneoplasm of the pancreaspancreatic adenocarcinoma

Identifiers

PMID30833417
PMCPMC6549570
OpenAlexW2919912164

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.