Evidence map›Paper›PMID 30833353›Full record

ArticleJournal of bacteriology2019

Redefining the Small Regulatory RNA Transcriptome in Streptococcus pneumoniae Serotype 2 Strain D39.

Dhriti Sinha, Kurt Zimmer, Todd A Cameron, Douglas B Rusch, Malcolm E Winkler, Nicholas R De Lay

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. The five homologous CiaR-controlled Ccn sRNAs ofbioRxiv : the preprint server for biology · 2024
    Article
  10. Article
  11. Small regulatory RNAs are mediators of theJournal of bacteriology · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Frontiers in cellular and infection microbiology · 2021
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Dhriti SinhaDepartment of Biology, Indiana University-Bloomington, Bloomington, Indiana, USA.
Kurt ZimmerIndiana University School of Informatics, Computing and Engineering, Indiana University-Bloomington, Bloomington, Indiana, USA.
Todd A CameronDepartment of Microbiology and Molecular Genetics, McGovern Medical School, University of Texas Health Science Center, Houston, Texas, USA.ORCID 0000-0002-6608-6551
Douglas B RuschCenter for Genomics and Bioinformatics, Indiana University-Bloomington, Bloomington, Indiana, USA.
Malcolm E WinklerDepartment of Biology, Indiana University-Bloomington, Bloomington, Indiana, USA winklerm@indiana.edu nicholas.r.delay@uth.tmc.edu.
Nicholas R De LayDepartment of Microbiology and Molecular Genetics, McGovern Medical School, University of Texas Health Science Center, Houston, Texas, USA winklerm@indiana.edu nicholas.r.delay@uth.tmc.edu.
Indiana University Bloomington · USThe University of Texas Health Science Center at Houston · USThe University of Texas MD Anderson Cancer Center · US

Funding

New Regulatory Interactions and Circuits that Mediate the Dynamics, Homeostasis, and Stress Responses of Peptidoglycan Synthesis in the Superbug Streptococcus pneumoniaeR35GM131767 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI MALCOLM E. WINKLER · 2019 to 2026
$4.8M
Spaciotemporal Regulation of Specific Penicillin Binding Protein (PBP) Function Determined by New Activity-Based ApproachesR01GM128439 · NIGMS · UNIVERSITY OF MINNESOTA · PI CARLSON, ERIN ELIZABETH, WINKLER, MALCOLM E. · 2018 to 2019
$936k
New Regulatory Circuits that Mediate Peptidoglycan Homeostasis and Cell Wall Stress Responses in the Superbug Streptococcus pneumoniaeR01GM127715 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI WINKLER, MALCOLM E. · 2018 to 2019
$630k
NIGMS NIH HHS R01 GM127715NIGMS NIH HHS R01 GM128439NIGMS NIH HHS R35 GM131767
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Gene Expression Regulation, BacterialTranscriptomeGenome, BacterialRNA, BacterialRNA, Small UntranslatedSequence Analysis, RNASerogroupStreptococcus pneumoniaeVirulenceRNA, BacterialRNA, Small UntranslateddRNA-seqpneumococcusRNA-seqserotype 2 D39serotype 4 TIGR4small RNA identificationsRNA transcriptome

Identifiers

PMID30833353
PMCPMC6597385
OpenAlexW2918353073

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.