Evidence map›Paper›PMID 30833292›Full record

ArticleG3 (Bethesda, Md.)2019

The Chromosome-Level Genome Assembly of European Grayling Reveals Aspects of a Unique Genome Evolution Process Within Salmonids.

Tiina Sävilammi, Craig R Primmer, Srinidhi Varadharajan, René Guyomard, Yann Guiguen, Simen R Sandve, L Asbjørn Vøllestad, Spiros Papakostas, Sigbjørn Lien

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
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  6. Extraordinary preservation of gene collinearity over three hundred million years revealed in homosporous lycophytes.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. The late-evolving salmon and trout join the GnRH1 club.Histochemistry and cell biology · 2023
    Article
  8. A homology guide for Pacific salmon genusEcology and evolution · 2023
    Article
  9. Review
  10. Article
  11. Article
  12. Mobile Elements in Ray-Finned Fish Genomes.Life (Basel, Switzerland) · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 4 countries.

Tiina SävilammiDepartment of Biology, University of Turku, 20014 Turku, Finland.
Craig R PrimmerOrganismal & Evolutionary Biology Research Program, Faculty of Biological & Environmental Sciences.
Srinidhi VaradharajanDepartment of Biosciences, University of Oslo, 0316 Oslo, Norway.ORCID 0000-0002-2033-0758
René GuyomardINRA, UMR1313 GABI Génétique Animale et Biologie Intégrative, Domaine de Vilvert, 78352, Jouy-en-Josas Cedex, France.
Yann GuiguenINRA, UR1037 Fish Physiology and Genomics, F-35000, Rennes, France.ORCID 0000-0001-5464-6219
Simen R SandveCentre for Integrative Genetics (CIGENE), Department of Animal and Aquacultural Sciences, Faculty of Biosciences, Norwegian University of Life Sciences, 1430 Ås, Norway.ORCID 0000-0003-4989-5311
L Asbjørn VøllestadDepartment of Biosciences, University of Oslo, 0316 Oslo, Norway.ORCID 0000-0002-9389-7982
Spiros PapakostasDepartment of Biology, University of Turku, 20014 Turku, Finland sigbjorn.lien@nmbu.no spiros.papakostas@utu.fi spiros.papakostas@gmail.com.ORCID 0000-0002-5563-0048
Sigbjørn LienCentre for Integrative Genetics (CIGENE), Department of Animal and Aquacultural Sciences, Faculty of Biosciences, Norwegian University of Life Sciences, 1430 Ås, Norway sigbjorn.lien@nmbu.no spiros.papakostas@utu.fi spiros.papakostas@gmail.com.
Norwegian University of Life Sciences · NOUniversity of Oslo · NOUniversity of Turku · FIFish Physiology and Genomics Institute · FRGénétique Animale et Biologie Intégrative · FRUniversity of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salmonids represent an intriguing taxonomical group for investigating genome evolution in vertebrates due to their relatively recent last common whole genome duplication event, which occurred between 80 and 100 million years ago. Here, we report on the chromosome-level genome assembly of European grayling (

Indexed as

ChromosomesEvolution, MolecularGenomeGenomicsAnimalsCentromereChromosome MappingComputational BiologyFemaleGenetic LinkageMaleRepetitive Sequences, Nucleic AcidSalmo salarchromosomal structurechromosome evolutiongenomic rearrangementskaryotype evolutionretrotransposons

Identifiers

PMID30833292
PMCPMC6505133
OpenAlexW2919287833

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.