Evidence map›Paper›PMID 30832731›Full record

ArticleBMC research notes2019

Colistin-resistant Escherichia coli with mcr genes in the livestock of rural small-scale farms in Ecuador.

Yoshimasa Yamamoto, Manuel Calvopina, Ricardo Izurieta, Irina Villacres, Ryuji Kawahara, Masahiro Sasaki, Mayumi Yamamoto

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Genomic Diversity and Extended-SpectrumInternational journal of microbiology · 2026
    Article
  4. Article
  5. Mobile Colistin Resistance (Antibiotics (Basel, Switzerland) · 2023
    Review
  6. Co-Harboring of Beta-Lactamases andAntibiotics (Basel, Switzerland) · 2023
    Article
  7. Article
  8. Colistin resistance inRevista panamericana de salud publica = Pan American journal of public health · 2023
    Article
  9. Worldwide Prevalence ofPathogens (Basel, Switzerland) · 2022
    Review
  10. Removal of Extended-Spectrum Beta-Lactamase-ProducingInternational journal of environmental research and public health · 2022
    Article
  11. Article
  12. First detection of mobilized colistin resistanceNew microbes and new infections · 2021
    Article
  13. Article
  14. Article
  15. Quantitative Analysis of Colistin-ResistantBioMed research international · 2021
    Article
  16. Research note: Occurrence ofFEMS microbes · 2020
    Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Yoshimasa YamamotoGraduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamadaoka, Suita, Osaka, 565-0871, Japan. yyamamot@sahs.med.osaka-u.ac.jp.ORCID http://orcid.org/0000-0002-2942-1672
Manuel CalvopinaUniversidad De Las Americas, Quito, Ecuador.
Ricardo IzurietaCollege of Public Health, University of South Florida, Tampa, FL, USA.
Irina VillacresUniversidad De Las Americas, Quito, Ecuador.
Ryuji KawaharaOsaka Institute of Public Health, Osaka, Japan.
Masahiro SasakiGraduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Mayumi YamamotoHealth Administration Center, Gifu University, Gifu, Japan.
The University of Osaka · JPUniversidad de Las Américas · ECGifu University · JPOsaka Prefectural Institute of Public Health · JPUniversity of South Florida · US

Funding

Japan Society for the Promotion of Science 17H01687
6 · The paper itself

Abstract

objectiveEmergence and dissemination of colistin-resistant (Co-R) bacteria harboring mobile colistin resistance genes pose a threat for treatment of infections caused by multi-drug resistant bacteria. Although the worldwide spread of Co-R bacteria is known, the precise state of Co-R bacterial dissemination in livestock of Andean countries remains unclear. Therefore, we investigated mcr-containing Co-R Escherichia coli dissemination in livestock on small-scale farms in two socioecologically different regions of Ecuador: the Amazonian rain-forest and the Pacific Coast.

resultsSixty-six rectal swab samples from 34 pigs and 32 chickens, from five farms in the two regions, were assessed for the dissemination of Co-R E. coli using the selective medium CHROMagar™ COL-APSE. mcr-containing Co-R E. coli were detected in the specimens at a high rate (47%; 31/66), but the detection rates of the two regions were not statistically different. Both chickens and pigs showed similar detection rates. All Co-R E. coli isolates harbored mcr-1. The minimum inhibitory concentrations of colistin were ≥ 8 mg/L, and 67.7% (21/31) of the Co-R isolates were multi-drug resistant. Pulsed-field gel electrophoresis revealed the limited relation between isolates. Thus, we revealed the high rate of widespread dissemination of Co-R bacteria in livestock regardless of the socioecological conditions in Ecuador.

Indexed as

Drug Resistance, BacterialEscherichia coliFarmsAnimalsAnti-Bacterial AgentsChickensColistinEcuadorEscherichia coli ProteinsLivestockMicrobial Sensitivity TestsRainforestSwineAnti-Bacterial AgentsColistinEscherichia coli ProteinsMCR-1 protein, E coliColistin-resistant bacteriaEcuadorEscherichia coliLivestockmcr

Identifiers

PMID30832731
PMCPMC6399824
OpenAlexW2930819517

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.