Evidence map›Paper›PMID 30830336›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2018

Overexpression of AtWRKY50 is correlated with enhanced production of sinapic derivatives in Arabidopsis.

Rana M F Hussain, Hye K Kim, Muhammad Khurshid, Muhammad T Akhtar, Huub J M Linthorst

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Article in Metabolomics : Official journal of the Metabolomic Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 25 citations in OpenAlex.

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  6. Expression and Functional Study ofFrontiers in plant science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Rana M F HussainInstitute of Biology, Leiden University, P.O. Box 9505, 2300 RA, Leiden, The Netherlands.
Hye K KimInstitute of Biology, Leiden University, P.O. Box 9505, 2300 RA, Leiden, The Netherlands.
Muhammad KhurshidInstitute of Biology, Leiden University, P.O. Box 9505, 2300 RA, Leiden, The Netherlands.
Muhammad T AkhtarInstitute of Biology, Leiden University, P.O. Box 9505, 2300 RA, Leiden, The Netherlands. tayyabakhtar@hotmail.com.
Huub J M LinthorstInstitute of Biology, Leiden University, P.O. Box 9505, 2300 RA, Leiden, The Netherlands.
Leiden University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionWRKY proteins belong to a plant-specific class of transcription factors. Seventy-four WKRY genes have been identified in Arabidopsis and many WRKY proteins are known to be involved in responses to stress, especially to biotic stress. They may act either as transcriptional activators or as repressors of genes that play roles in the stress response. A number of studies have proposed the connection of Arabidopsis WRKY transcription factors in induced pathogenesis-related (PR) gene expression, although no direct evidence has been presented for specific WRKY-PR promoter interactions.

objectiveWe previously identified AtWRKY50 as a transcriptional activator of SAR gene PR1. Although PR1 accumulates to high levels in plants after attack by pathogens, its function is still elusive. Here we investigated the effects of overexpression of several WRKY proteins, including AtWRKY50, on the metabolome of Arabidopsis thaliana.

methodsThe influence of overexpression of WRKY proteins on the metabolites of Arabidopsis was investigated by using an NMR spectroscopy-based metabolomic approach. The

resultsThe results showed that the metabolome of transgenic Arabidopsis seedlings overexpressing AtWRKY50 was different from wild type Arabidopsis and transgenic Arabidopsis overexpressing other WRKY genes. Amongst other metabolites, sinapic acid and 1-O-sinapoyl-β-D-glucose especially appeared to be the most prominent discriminating metabolites, accumulating to levels 2 to 3 times higher in the AtWRKY50 overexpressor lines.

conclusionOur results indicate a possible involvement of AtWRKY50 in secondary metabolite production in Arabidopsis, in particular of hydroxycinnamates such as sinapic acid and 1-O-sinapoyl-β-D-glucose.

Indexed as

ArabidopsisArabidopsis ProteinsCinnamatesCoumaric AcidsGlucosidesTranscription FactorsArabidopsis ProteinsCinnamatesCoumaric AcidsGlucosidessinapinic acidsinapoylglucoseTranscription FactorsWRKY50 protein, Arabidopsis1-O-sinapoyl-β-D-glucoseArabidopsisAtWRKYNMR spectroscopyOverexpressionSinapic acid

Identifiers

PMID30830336
OpenAlexW2794084563

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.