Evidence map›Paper›PMID 30828836›Full record

ArticleJournal of computational chemistry2019

U-shaped caveolin-1 conformations are tightly regulated by hydrogen bonds with lipids.

Soohyung Park, Kerney J Glover, Wonpil Im

Abstract read
In one paragraph

Article in Journal of computational chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Caveolin assemblies displace one bilayer leaflet to organize and bend membranes.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Soohyung ParkDepartment of Biological Sciences and Bioengineering, Lehigh University, 111 Research Dr. Bethlehem, Pennsylvania 18015.
Kerney J GloverDepartment of Chemistry, Lehigh University, 6 E. Packer Ave. Bethlehem, Pennsylvania 18015.
Wonpil ImDepartment of Biological Sciences and Bioengineering, Lehigh University, 111 Research Dr. Bethlehem, Pennsylvania 18015.ORCID 0000-0001-5642-6041

Funding

Synthetic Antigen Binder CoreU54GM087519 · NIGMS · UNIVERSITY OF CHICAGO · PI ZHOU, MING · 2010 to 2017
$31.9M
Investigation of Caveolin Structure, Topology, and OligomerizationR01GM093258 · NIGMS · LEHIGH UNIVERSITY · PI GLOVER, KERNEY JEBRELL · 2012 to 2016
$1.7M
Mechanisms & Energetics of Transmembrane-induced Signaling of Cytokine ReceptorsR01GM092950 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI IM, WONPIL · 2010 to 2014
$1.4M
NIGMS NIH HHS R01 GM092950NIGMS NIH HHS R01 GM093258NIGMS NIH HHS U54 GM087519
6 · The paper itself

Abstract

The structure and dynamics of a truncated (residues 82-136) caveolin-1 (Cav1) construct having a helix-break-helix motif are explored by both all-atom free energy and molecular dynamics (MD) simulations in an explicit bilayer membrane. Two stable Cav1 conformations with small (LB-Cav1) and large hinge angles (RB-Cav1) between two helices are identified although their relative free energy cannot be reliably estimated due to the sampling issues. RB-Cav1s contain one or two lipids residing between the helices that are hydrogen bonded (h-bonded) to both helices in a multidentate fashion. LB-Cav1s show the helices with mono-dentate lipid h-bond interactions or multidentate interactions limited to a single helix at most. The two conformational states of Cav1 remain their initial state during 2-μs MD simulation, suggesting that there is a significant hidden barrier (other than the insertion depth of Cav1 and its hinge angle) and the Cav1 conformational states are tightly regulated by the h-bonds between Cav1 and lipids along with the associated lipid rearrangement during the course of Cav1 conformational changes. © 2019 Wiley Periodicals, Inc.

Indexed as

Molecular Dynamics SimulationCaveolin 1Hydrogen BondingLipid BilayersLipidsProtein ConformationCaveolin 1Lipid BilayersLipidscaveolaehydrogen bondmembrane protein conformation and orientationprotein-lipid interactions

Identifiers

PMID30828836
PMCPMC6458063

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.