Evidence map›Paper›PMID 30828502›Full record

ArticleApplications in plant sciences2019

Development of 15 microsatellite loci in the endangered

Sarah M Swope, Alan E Pepper, Geneva T Lee, Brittany A Burnett, Hannah M Horten

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Applications in plant sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Development of 15 microsatellite loci in the endangeredApplications in plant sciences · 2019
    Article
  3. Corrigendum.Applications in plant sciences
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Sarah M SwopeDepartment of Biology Mills College 5000 MacArthur Blvd. Oakland California 94613 USA.
Alan E PepperDepartment of Biology Texas A&M University College Station Texas 77843 USA.
Geneva T LeeDepartment of Biology Mills College 5000 MacArthur Blvd. Oakland California 94613 USA.
Brittany A BurnettDepartment of Biology Mills College 5000 MacArthur Blvd. Oakland California 94613 USA.
Hannah M HortenDepartment of Environmental Sciences Mills College 5000 MacArthur Blvd. Oakland California 94613 USA.
Mills College · USTexas A&M University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

premise of the studyThe endangered METHODS AND

resultsWe used Illumina HiSeq high-throughput sequencing to develop 15 microsatellite markers, 14 of which were polymorphic. These di- and trinucleotide repeats yielded one to 11 alleles per locus in 61 plants across the two populations. Levels of observed and expected heterozygosities ranged from 0.108 to 0.946 and 0.257 to 0.839, respectively. We demonstrated cross-amplification in a second rare subspecies,

conclusionsThese are the first microsatellites reported for this subspecies, and they will aid in the inclusion of genetic information in conservation planning. Cross-amplification was demonstrated in two related taxa, including one of conservation concern.

Indexed as

Brassicaceaeconservationfragmentationmicrosatellitepopulation geneticsStreptanthus glandulosus subsp. nigerStreptanthus glandulosus subsp. secundusStreptanthus tortuosus

Identifiers

PMID30828502
PMCPMC6384297
OpenAlexW2911886559

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.