Evidence map›Paper›PMID 30827941›Full record

ArticleCellular and molecular gastroenterology and hepatology2019

Cellular Plasticity of Defa4

Jennifer C Jones, Constance D Brindley, Nicholas H Elder, Martin G Myers, Michael W Rajala, Christopher M Dekaney, Eoin N McNamee, Mark R Frey, Noah F Shroyer, Peter J Dempsey

Open access · goldAbstract read
In one paragraph

Article in Cellular and molecular gastroenterology and hepatology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
4.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 102 citations in OpenAlex.

  1. Article
  2. Article
  3. Building and regenerating intestines by manipulating intestinal stem cells.Nature reviews. Gastroenterology & hepatology · 2026
    Review
  4. Article
  5. Review
  6. Regulation of STK38 by autophagy governs YAP1 activity during paligenosis.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Review
  12. Review
  13. Nuclei sense complex tissue shape and direct intestinal stem cell fate.bioRxiv : the preprint server for biology · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Dietary and metabolic effects on intestinal stem cells in health and disease.Nature reviews. Gastroenterology & hepatology · 2025
    Review
  20. Review

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Jennifer C JonesCell Biology, Stem Cells and Development Graduate Program, University of Colorado Medical School, Aurora, Colorado.
Constance D BrindleyDivision of Gastroenterology, Hepatology and Nutrition, Department of Pediatrics, University of Colorado Medical School, Aurora, Colorado.
Nicholas H ElderDivision of Gastroenterology, Hepatology and Nutrition, Department of Pediatrics, University of Colorado Medical School, Aurora, Colorado.
Martin G MyersDivision of Metabolism, Endocrinology and Diabetes, Department of Internal Medicine, Department of Molecular and Integrative Physiology, University of Michigan, Ann Arbor, Michigan.
Michael W RajalaDivision of Gastroenterology, Department of Digestive Disease and Transplantation, Einstein Health Network, Philadelphia, Pennsylvania.
Christopher M DekaneyDepartment of Molecular Biomedical Sciences, College of Veterinary Medicine, North Carolina State University, Raleigh, North Carolina.
Eoin N McNameeMucosal Immunology Program, University of Colorado Medical School, Aurora, Colorado.
Mark R FreySaban Research Institute, Children's Hospital Los Angeles, Department of Pediatrics, Department of Biochemistry and Molecular Biology, Keck School of Medicine, University of Southern California, Los Angeles, California.
Noah F ShroyerSection of Gastroenterology and Hepatology, Department of Medicine, Baylor College of Medicine, Houston, Texas.
Peter J DempseyCell Biology, Stem Cells and Development Graduate Program, University of Colorado Medical School, Aurora, Colorado; Division of Gastroenterology, Hepatology and Nutrition, Department of Pediatrics, University of Colorado Medical School, Aurora, Colorado. Electronic address: Peter.Dempsey@ucdenver.edu.
University of Colorado Denver · USBaylor College of Medicine · USChildren's Hospital of Los Angeles · USHealth Net · USNorth Carolina State University · USUniversity of Michigan–Ann Arbor · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Regional Pilot And Feasibility Study Grants ProgramP30DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Mehboob A Hussain · 2013 to 2026
$24.3M
Mechanisms of intestinal stem cell differentiation and plasticity.R01DK118904 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI SHROYER, NOAH FREEMAN · 2018 to 2020
$1.7M
Mechanisms and Function of Paneth Cell Expansion After Doxorubicin-Induced DamageR01DK100508 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DEKANEY, CHRISTOPHER M · 2014 to 2018
$1.6M
ADAM10 in Intestinal Homeostasis and RegenerationR01DK093697 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DEMPSEY, PETER J · 2012 to 2016
$1.5M
NCI NIH HHS P30 CA046934NIDDK NIH HHS P30 DK020572NIDDK NIH HHS R01 DK093697NIDDK NIH HHS R01 DK100508NIDDK NIH HHS R01 DK118904
6 · The paper itself

Abstract

BACKGROUND &

aimsLoss of leucine-rich repeat-containing G-protein-coupled receptor 5-positive crypt base columnar cells provides permissive conditions for different facultative stem cell populations to dedifferentiate and repopulate the stem cell compartment. In this study, we used a defensin α4-Cre recombinase (Defa4Cre) line to define the potential of Paneth cells to dedifferentiate and contribute to intestinal stem cell (ISC) maintenance during normal homeostasis and after intestinal injury.

methodsSmall intestine and enteroids from Defa4

resultsDefa4

conclusionsOur studies have shown that Defa4

Indexed as

Cell PlasticityADAM10 ProteinAdenomaAdenomatous Polyposis Coli ProteinAllelesalpha-DefensinsAnimalsCell DedifferentiationCell LineageClone CellsDoxorubicinGene DeletionHomeostasisHyperplasiaIntegrasesIntestinesADAM10 ProteinAdenomatous Polyposis Coli Proteinalpha-DefensinsCre recombinaseDoxorubicinIntegrasesReceptors, NotchChemotherapyDefensinEnteroidIntestinal Stem CellsNotchPaneth CellRegeneration

Identifiers

PMID30827941
PMCPMC6402430
OpenAlexW2902462655

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.