Evidence map›Paper›PMID 30825182›Full record

ArticleCellular oncology (Dordrecht, Netherlands)2019

Computer aided quantification of intratumoral stroma yields an independent prognosticator in rectal cancer.

Oscar G F Geessink, Alexi Baidoshvili, Joost M Klaase, Babak Ehteshami Bejnordi, Geert J S Litjens, Gabi W van Pelt, Wilma E Mesker, Iris D Nagtegaal, Francesco Ciompi, Jeroen A W M van der Laak

Open access · hybridAbstract read
In one paragraph

Article in Cellular oncology (Dordrecht, Netherlands), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed, 4 pooled it
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 4 syntheses or guidelines pooled it, 124 citations in OpenAlex.

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4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Oscar G F GeessinkDepartment of Pathology, Radboud Institute for Health Sciences, Radboud University Medical Center, P.O.Box 9101, 6500 HB, Nijmegen, The Netherlands.
Alexi BaidoshviliLaboratory for Pathology East Netherlands (LabPON), Hengelo, The Netherlands.
Joost M KlaaseDepartment of Surgery, Medisch Spectrum Twente, Enschede, The Netherlands.
Babak Ehteshami BejnordiDiagnostic Image Analysis Group (DIAG), Radboud University Medical Center, Nijmegen, The Netherlands.
Geert J S LitjensDepartment of Pathology, Radboud Institute for Health Sciences, Radboud University Medical Center, P.O.Box 9101, 6500 HB, Nijmegen, The Netherlands.
Gabi W van PeltDepartment of Surgery, Leiden University Medical Center, Leiden, The Netherlands.
Wilma E MeskerDepartment of Surgery, Leiden University Medical Center, Leiden, The Netherlands.
Iris D NagtegaalDepartment of Pathology, Radboud Institute for Health Sciences, Radboud University Medical Center, P.O.Box 9101, 6500 HB, Nijmegen, The Netherlands.
Francesco CiompiDepartment of Pathology, Radboud Institute for Health Sciences, Radboud University Medical Center, P.O.Box 9101, 6500 HB, Nijmegen, The Netherlands.
Jeroen A W M van der LaakDepartment of Pathology, Radboud Institute for Health Sciences, Radboud University Medical Center, P.O.Box 9101, 6500 HB, Nijmegen, The Netherlands. Jeroen.vanderlaak@radboudumc.nl.
Radboud University Medical Center · NLRadboud University Nijmegen · NLLeiden University Medical Center · NLMedisch Spectrum Twente · NLThales (Netherlands) · NL

Funding

KWF Kankerbestrijding KUN 2014-7032
6 · The paper itself

Abstract

purposeTumor-stroma ratio (TSR) serves as an independent prognostic factor in colorectal cancer and other solid malignancies. The recent introduction of digital pathology in routine tissue diagnostics holds opportunities for automated TSR analysis. We investigated the potential of computer-aided quantification of intratumoral stroma in rectal cancer whole-slide images.

methodsHistological slides from 129 rectal adenocarcinoma patients were analyzed by two experts who selected a suitable stroma hot-spot and visually assessed TSR. A semi-automatic method based on deep learning was trained to segment all relevant tissue types in rectal cancer histology and subsequently applied to the hot-spots provided by the experts. Patients were assigned to a 'stroma-high' or 'stroma-low' group by both TSR methods (visual and automated). This allowed for prognostic comparison between the two methods in terms of disease-specific and disease-free survival times.

resultsWith stroma-low as baseline, automated TSR was found to be prognostic independent of age, gender, pT-stage, lymph node status, tumor grade, and whether adjuvant therapy was given, both for disease-specific survival (hazard ratio = 2.48 (95% confidence interval 1.29-4.78)) and for disease-free survival (hazard ratio = 2.05 (95% confidence interval 1.11-3.78)). Visually assessed TSR did not serve as an independent prognostic factor in multivariate analysis.

conclusionsThis work shows that TSR is an independent prognosticator in rectal cancer when assessed automatically in user-provided stroma hot-spots. The deep learning-based technology presented here may be a significant aid to pathologists in routine diagnostics.

Indexed as

Deep LearningAgedDiagnosis, Computer-AssistedFemaleHumansKaplan-Meier EstimateMaleMiddle AgedMultivariate AnalysisNeoplasm StagingPathology, ClinicalPrognosisRectal NeoplasmsStromal CellsAutomated analysisComputational pathologyDeep learningPrognosisRectal carcinomaTumor-stroma ratio

Identifiers

PMID30825182
PMCPMC12994350
OpenAlexW2920118524

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.