Evidence map›Paper›PMID 30824790›Full record

ArticleScientific reports2019

Mutational convergence acts as a major player in adaptive parallel evolution of Shigella spp.

Achsah K Thomas, Sruthy Preetha, Anjana Omanakuttan, Lakkaraju Vidyullata, Anjaly Ashokan, Vyshakh Rajachandran, Sujay Chattopadhyay

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Achsah K ThomasSchool of Biotechnology, Amrita Vishwa Vidyapeetham, Kollam, 690 525, Kerala, India.
Sruthy PreethaSchool of Biotechnology, Amrita Vishwa Vidyapeetham, Kollam, 690 525, Kerala, India.
Anjana OmanakuttanSchool of Biotechnology, Amrita Vishwa Vidyapeetham, Kollam, 690 525, Kerala, India.
Lakkaraju VidyullataSchool of Biotechnology, Amrita Vishwa Vidyapeetham, Kollam, 690 525, Kerala, India.
Anjaly AshokanSchool of Biotechnology, Amrita Vishwa Vidyapeetham, Kollam, 690 525, Kerala, India.
Vyshakh RajachandranSchool of Biotechnology, Amrita Vishwa Vidyapeetham, Kollam, 690 525, Kerala, India.ORCID 0000-0003-4340-426X
Sujay ChattopadhyaySchool of Biotechnology, Amrita Vishwa Vidyapeetham, Kollam, 690 525, Kerala, India. sujayc@am.amrita.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shigella spp., emerging from multiple origins of Escherichia coli, poses a significant health threat as a causative agent of bacillary dysentery. While multiple serotypes of four different species have evolved via independent lineages, Shigella spp. are designated as a single pathotype, primarily because of their common mode of pathogenesis. Convergent horizontal transfer events have so far been attributed to the commonalities in the evolution of virulence across diverse lineages. However, the role of mutational convergence in such parallel evolution is not yet well understood. Here we have carried out a genome-wide analysis of Shigella strains from all four species to detect the core genes (i.e. the ones present in all analyzed strains) acquiring convergent mutations of evolutionarily recent origin. Simulation studies show non-neutral accumulation of these convergent mutations across species, suggesting their adaptive role in the evolution of Shigella virulence. S. dysenteriae strain 197, representing highly virulent type 1 (Sd1) clone, carries excessively high number of core genes with recent convergent mutations compared to other analyzed strains. We propose that this high frequency of adaptive convergence in S. dysenteriae strain 197 could be linked to recent re-emergence of the Sd1 clone and its increased resistance to antimicrobials.

Indexed as

Evolution, MolecularClone CellsGenes, EssentialGenetic VariationGenome, BacterialMultilocus Sequence TypingMutationPhylogenyShigella

Identifiers

PMID30824790
PMCPMC6397287

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