Evidence map›Paper›PMID 30824748›Full record

ArticleScientific reports2019

A Portion of the Apomixis Locus of Paspalum Simplex is Microsyntenic with an Unstable Chromosome Segment Highly Conserved Among Poaceae.

Giulio Galla, Lorena A Siena, Juan Pablo A Ortiz, Helmut Baumlein, Gianni Barcaccia, Silvina C Pessino, Michele Bellucci, Fulvio Pupilli

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
  2. Review
  3. Advances in genomic characterization of Urochloa humidicola: exploring polyploid inheritance and apomixis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  4. Review
  5. Article
  6. Review
  7. The Auxin-Response RepressorPlants (Basel, Switzerland) · 2022
    Article
  8. Plants (Basel, Switzerland) · 2021
    Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. A High-Density Linkage Map of the Forage GrassFrontiers in plant science · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Giulio GallaDepartment of Agriculture Food Natural resources Animals and Environment (DAFNAE), University of Padova, 35020, Legnaro (PD), Italy.
Lorena A SienaInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR), CONICET-UNR, Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, S2125ZAA, Zavalla, Argentina.
Juan Pablo A OrtizInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR), CONICET-UNR, Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, S2125ZAA, Zavalla, Argentina.
Helmut BaumleinThe Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), D-06466, Gatersleben, Germany.
Gianni BarcacciaDepartment of Agriculture Food Natural resources Animals and Environment (DAFNAE), University of Padova, 35020, Legnaro (PD), Italy.
Silvina C PessinoInstituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR), CONICET-UNR, Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, S2125ZAA, Zavalla, Argentina.
Michele BellucciInstitute of Biosciences and Bioresources (IBBR), National Research Council (CNR), 06128, Perugia, Italy.ORCID 0000-0001-7476-9603
Fulvio PupilliInstitute of Biosciences and Bioresources (IBBR), National Research Council (CNR), 06128, Perugia, Italy. fulvio.pupilli@ibbr.cnr.it.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The introgression of apomixis in major seed crops, would guarantee self-seeding of superior heterotic seeds over generations. In the grass species Paspalum simplex, apomixis is controlled by a single locus in which recombination is blocked. In the perspective of isolating the genetic determinants of apomixis, we report data on sequencing, in silico mapping and expression analysis of some of the genes contained in two cloned genomic regions of the apomixis locus of P. simplex. In silico mapping allowed us to identify a conserved synteny group homoeologous to the apomixis locus, located on a telomeric position of chromosomes 12, 8, 3 and 4 of rice, Sorghum bicolor, Setaria italica and Brachypodium distachyum, respectively, and on a more centromeric position of maize chromosome 1. Selected genes of the apomixis locus expressed sense and antisense transcripts in reproductively committed cells of sexual and apomictic ovules. Some of the genes considered here expressed apomixis-specific allelic variants which showed partial non-overlapping expression patterns with alleles shared by sexual and apomictic reproductive phenotypes. Our findings open new routes for the isolation of the genetic determinants of apomixis and, in perspective, for its introgression in crop grasses.

Indexed as

Genetic LociChromosomes, PlantGene Expression Regulation, PlantPaspalum

Identifiers

PMID30824748
PMCPMC6397161

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.