Evidence map›Paper›PMID 30821899›Full record

ArticleClinical and translational science2019

Determinants of Cytochrome P450 2D6 mRNA Levels in Healthy Human Liver Tissue.

Miaoran Ning, Julio D Duarte, Faith Stevison, Nina Isoherranen, Leah H Rubin, Hyunyoung Jeong

Open access · goldAbstract read
In one paragraph

Article in Clinical and translational science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Miaoran NingDepartment of Biopharmaceutical Sciences, College of Pharmacy, University of Illinois at Chicago, Chicago, Illinois, USA.
Julio D DuarteDepartment of Pharmacotherapy and Translational Research, College of Pharmacy, Center for Pharmacogenomics, University of Florida, Gainesville, Florida, USA.
Faith StevisonDepartment of Pharmaceutics, School of Pharmacy, University of Washington, Seattle, Washington, USA.ORCID 0000-0002-7318-060X
Nina IsoherranenDepartment of Pharmaceutics, School of Pharmacy, University of Washington, Seattle, Washington, USA.
Leah H RubinDepartment of Psychiatry, University of Illinois at Chicago, Chicago, Illinois, USA.
Hyunyoung JeongDepartment of Biopharmaceutical Sciences, College of Pharmacy, University of Illinois at Chicago, Chicago, Illinois, USA.ORCID 0000-0001-7769-7676
University of Illinois Chicago · USUniversity of Washington · USAmerican Association of Colleges of Pharmacy · USJohns Hopkins University · US

Funding

Vector and Transgenic Mouse CoreP30DK017047 · NIDDK · UNIVERSITY OF WASHINGTON · PI Tomas Vaisar · 1986 to 2026
$41.4M
Pharmacological Sciences SupplementT32GM007750 · NIGMS · UNIVERSITY OF WASHINGTON · PI ATKINS, WILLIAM M · 1985 to 2023
$12.6M
Pharmacogenetic Risks Operating in Failure Of Nifedipine to Delay Pre-Term Birth (PROFOUND-PTB)R01HD089455 · NICHD · UNIVERSITY OF ILLINOIS AT CHICAGO · PI JEONG, HYUNYOUNG · 2017 to 2021
$3.4M
Molecular basis of interindividual variability in CYP2D6-mediated drug metabolismR01GM112746 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI JEONG, HYUNYOUNG · 2015 to 2018
$1.2M
Improving treatment personalization for pulmonary hypertension associated with diastolic heart failureK23GM112014 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI DUARTE, JULIO DAVID · 2015 to 2018
$711k
NICHD NIH HHS R01 HD089455NIDDK NIH HHS P30 DK017047NIGMS NIH HHS K23 GM112014NIGMS NIH HHS R01 GM112746NIGMS NIH HHS T32 GM007750
6 · The paper itself

Abstract

Cytochrome P450 2D6 (CYP2D6) is a major drug-metabolizing enzyme that exhibits large interindividual variability. Recent studies suggest that differential transcriptional regulation of CYP2D6 in part may be responsible for the variability. In this study, we characterized potential determinants of CYP 2D6  transcript levels in healthy human liver tissue samples (n = 115), including genetic polymorphisms in CYP2D6 and the genes encoding transcription regulators for CYP2D6 expression; mRNA expression of the transcription factors and their known target genes; and hepatic levels of bile acids and retinoids, agents that modulate the expression/activity of the transcription factors. Their associations with CYP2D6 mRNA levels in the tissues were examined. Results from multivariable linear regression analysis revealed CYP8B1 mRNA level and rs3892097, the single- nucleotide polymorphism defining the nonfunctional CYP2D6*4 allele, as the two most significant predictors of CYP2D6 mRNA levels in the liver tissue samples, explaining 30% of the variability.

Indexed as

Bile Acids and SaltsCytochrome P-450 CYP2D6FemaleGene DosageHumansLiverMaleMiddle AgedPolymorphism, GeneticRegression AnalysisRNA, MessengerTretinoinBile Acids and SaltsCytochrome P-450 CYP2D6RNA, MessengerTretinoin

Identifiers

PMID30821899
PMCPMC6618095
OpenAlexW2919842218

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.