Evidence map›Paper›PMID 30820649›Full record

ArticlePlanta2019

Silicon supply affects the root transcriptome of Brassica napus L.

Cylia Haddad, Jacques Trouverie, Mustapha Arkoun, Jean-Claude Yvin, José Caïus, Véronique Brunaud, Philippe Laîné, Philippe Etienne

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
7.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Two-Component System Genes inInternational journal of molecular sciences · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Physiological and Transcriptional Responses of Industrial Rapeseed (International journal of molecular sciences · 2019
    Article
  13. Silicon Promotes Agronomic Performance inPlants (Basel, Switzerland) · 2019
    Article
  14. Silicon Uptake and Localisation in Date Palm (Frontiers in plant science · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Cylia HaddadUNICAEN, INRA, UMR 950 EVA, SFR Normandie Végétal (FED4277), Normandie Université, 14000, Caen, France.
Jacques TrouverieUNICAEN, INRA, UMR 950 EVA, SFR Normandie Végétal (FED4277), Normandie Université, 14000, Caen, France.
Mustapha ArkounCentre Mondial d'Innovation,Groupe Roullier, 35400, Saint-Malo, France.
Jean-Claude YvinCentre Mondial d'Innovation,Groupe Roullier, 35400, Saint-Malo, France.
José CaïusInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, INRA, Université Paris-Sud, Université d'Evry, Université Paris-Saclay, Bâtiment 630, Plateau de Moulon, 91192, Gif-sur-Yvette, France.
Véronique BrunaudInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, INRA, Université Paris-Sud, Université d'Evry, Université Paris-Saclay, Bâtiment 630, Plateau de Moulon, 91192, Gif-sur-Yvette, France.
Philippe LaînéUNICAEN, INRA, UMR 950 EVA, SFR Normandie Végétal (FED4277), Normandie Université, 14000, Caen, France.
Philippe EtienneUNICAEN, INRA, UMR 950 EVA, SFR Normandie Végétal (FED4277), Normandie Université, 14000, Caen, France. philippe.etienne@unicaen.fr.ORCID http://orcid.org/0000-0002-4531-3874
Normandie Université · FRCentre Hospitalier de Saint-Malo · FRUniversité Paris-Sud · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionModulation of gene expression in roots of Brassica napus by silicon (Si) supply could allow plants to cope with future stresses. The origin of the beneficial effects of silicon (Si) in plants, especially when they are subject to stress, remains poorly understood. Some authors have shown that Si alleviates plant stress and consider that this is mainly due to a mechanical effect on the cell wall. In addition, the other studies have shown that Si can also affect gene expression and modulate a number of metabolic pathways, especially in plants cultivated under stress conditions. Previously, Haddad et al. (Front Plant Sci 9:5-16, 2018) showed that a pretreatment of Brassica napus plants with Si (1.7 mM) for 1 week alleviated the stress induced by N privation. These results suggest that this improved resistance in Si-treated plants might be due to the establishment of defense mechanisms prior to exposure to the N stress. The aim of the current work was to test this assumption in Brassica napus roots (where Si is mainly stored) using a transcriptomic approach via the RNA sequencing. Our results indicated that the Si supply leads to a modulation of the expression of genes in Brassica napus roots. Functional categorization of the differentially expressed genes demonstrated that numerous genes are involved in different metabolic pathways and especially in cell wall synthesis, phytohormone metabolism, and stress responses. All these results show that Si modifies the root metabolism of B. napus, which could allow a better adaptation to future stresses.

Indexed as

Brassica napusGene Expression Regulation, PlantPlant RootsSiliconTranscriptomeSiliconBrassica napusRNAseqRootsSilicon

Identifiers

PMID30820649
OpenAlexW2918393142

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.