Evidence map›Paper›PMID 30820542›Full record

ArticleNucleic acids research2019

Safety evaluation of 2'-deoxy-2'-fluoro nucleotides in GalNAc-siRNA conjugates.

Maja M Janas, Ivan Zlatev, Ju Liu, Yongfeng Jiang, Scott A Barros, Jessica E Sutherland, Wendell P Davis, Jingxuan Liu, Christopher R Brown, Xiumin Liu and 24 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 77 citations in OpenAlex.

  1. Pooled it
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  9. Nucleic acid drugs: recent progress and future perspectives.Signal transduction and targeted therapy · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors at 1 institution in 1 country.

Maja M JanasAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Ivan ZlatevAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Ju LiuAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Yongfeng JiangAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Scott A BarrosAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Jessica E SutherlandAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Wendell P DavisAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Jingxuan LiuAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Christopher R BrownAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Xiumin LiuAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Mark K SchlegelAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Lauren BlairAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Xuemei ZhangAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Biplab DasAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Chris TranAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Krishna AluriAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Jing LiAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Saket AgarwalAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Ramesh IndrakantiAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Klaus CharisseAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Jayaprakash NairAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Shigeo MatsudaAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Kallanthottathil G RajeevAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Tracy ZimmermannAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Laura Sepp-LorenzinoAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Yuanxin XuAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Akin AkincAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Kevin FitzgeraldAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Akshay K VaishnawAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Peter F SmithAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Muthiah ManoharanAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Vasant JadhavAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Jing-Tao WuAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Martin A MaierAlnylam Pharmaceuticals, Inc., Cambridge, MA 02142, USA.
Alnylam Pharmaceuticals (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

For oligonucleotide therapeutics, chemical modifications of the sugar-phosphate backbone are frequently used to confer drug-like properties. Because 2'-deoxy-2'-fluoro (2'-F) nucleotides are not known to occur naturally, their safety profile was assessed when used in revusiran and ALN-TTRSC02, two short interfering RNAs (siRNAs), of the same sequence but different chemical modification pattern and metabolic stability, conjugated to an N-acetylgalactosamine (GalNAc) ligand for targeted delivery to hepatocytes. Exposure to 2'-F-monomer metabolites was low and transient in rats and humans. In vitro, 2'-F-nucleoside 5'-triphosphates were neither inhibitors nor preferred substrates for human polymerases, and no obligate or non-obligate chain termination was observed. Modest effects on cell viability and mitochondrial DNA were observed in vitro in a subset of cell types at high concentrations of 2'-F-nucleosides, typically not attained in vivo. No apparent functional impact on mitochondria and no significant accumulation of 2'-F-monomers were observed after weekly administration of two GalNAc-siRNA conjugates in rats for ∼2 years. Taken together, the results support the conclusion that 2'-F nucleotides can be safely applied for the design of metabolically stabilized therapeutic GalNAc-siRNAs with favorable potency and prolonged duration of activity allowing for low dose and infrequent dosing.

Indexed as

AcetylgalactosamineAnimalsDeoxyribonucleotidesFemaleFluorineHumansMaleRatsRats, Sprague-DawleyRNA, Small InterferingAcetylgalactosamineDeoxyribonucleotidesFluorinerevusiranRNA, Small Interfering

Identifiers

PMID30820542
PMCPMC6468299
OpenAlexW2920474776

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.