Evidence map›Paper›PMID 30820335›Full record

ArticlePorcine health management2019

Monitoring PRRSV-1 in suckling piglets in an endemic herd using reverse transcriptase quantitative real time polymerase chain reaction: comparison of the rate of detection in serum and oral fluid samples and evaluation of pooling.

Arnaud Lebret, Gwenaël Boulbria, Pauline Berton, Pierre-Yves Moalic, Jean Le Guennec, Franck Bouchet, Vincent Auvigne, Valérie Normand

Open access · goldAbstract read
In one paragraph

Article in Porcine health management, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Arnaud LebretPorc. Spective Swine Vet Pratice, Chene Vert Conseil veterinary group, ZA du Gohélève, 56920 Noyal-Pontivy, France.ORCID 0000-0002-8432-3266
Gwenaël BoulbriaPorc. Spective Swine Vet Pratice, Chene Vert Conseil veterinary group, ZA du Gohélève, 56920 Noyal-Pontivy, France.
Pauline BertonPorc. Spective Swine Vet Pratice, Chene Vert Conseil veterinary group, ZA du Gohélève, 56920 Noyal-Pontivy, France.
Pierre-Yves MoalicLabofarm Finalab Veterinary Laboratory Group, 4 rue Théodore Botrel, 22600 Loudéac, France.
Jean Le GuennecPorc. Spective Swine Vet Pratice, Chene Vert Conseil veterinary group, ZA du Gohélève, 56920 Noyal-Pontivy, France.
Franck BouchetPorc. Spective Swine Vet Pratice, Chene Vert Conseil veterinary group, ZA du Gohélève, 56920 Noyal-Pontivy, France.
Vincent AuvigneEkipaj, 22 rue d'Assas, 49000 Angers, France.
Valérie NormandPorc. Spective Swine Vet Pratice, Chene Vert Conseil veterinary group, ZA du Gohélève, 56920 Noyal-Pontivy, France.
University of Kivu · CDUniversité d'Angers · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDefining shedding and exposure status for PRRSV is essential in herd stabilisation protocols and weaning-age pigs is a key subpopulation. Oral fluid (OF) sampling is a welfare-friendly and cost saving promising alternative to blood sampling. The first objective of our study was to compare the rate of detection of PRRSV-1 in individual serum sample, individual OF sample, litter-based OF sample, collected the day before weaning. The second objective was to evaluate the interest of pooling samples.

resultsThe study was performed on a 210-sows, PRRSV-1 exposed, with confirmed shedding, non-vaccinated against PRRSV, herd. 80 litters were sampled and 26 were viropositive and therefore included. The rate of detection of PRRSV-1 with RT-qrtPCR in blood samples, iOF and cOF was 67, 23 and 77%, respectively. The Ct values from RT-qrtPCR on collective OF were statistically lower if the serum of the piglet of the litter was positive. The lower the Cycle threshold (Ct) value of RT-qrtPCR on collective OF, the higher the probability that the serum sampled in the same litter was positive. Ability to detect PRRSV RNA after pooling was 67% for sera and 58% for cOF.

conclusionsThe rate of detection of PRRSV-1 was about the same in cOF and blood samples. Virus sequencing, if required, should be performed on individual serum samples. The smaller the Ct of a cOF sample from a litter, the greater the likelihood that the serum sample from a piglet of that litter is positive.A cost-effective and representative sampling protocol to monitor sow herds stabilisation of a sow batch could be: to collect both cOF and one serum sample per litter; to perform firstly RT-qrtPCR on pooled cOF; in case of negative results to consider the batch negative; in case of positive results in a unvaccinated herd or a killed vaccine vaccinated one to consider the batch positive; in case of positive result in a herd vaccinated with a modified live vaccine serum samples of litters with positive cOF should be tested for sequencing (selecting the litters with the lowest Ct for cOF).

Indexed as

DiagnosticOral fluidPCRPigPoolingPRRSSerumSuckling piglets

Identifiers

PMID30820335
PMCPMC6381726
OpenAlexW2921691234

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.