Evidence map›Paper›PMID 30819820›Full record

ArticleGenes & development2019

CDK12 phosphorylates 4E-BP1 to enable mTORC1-dependent translation and mitotic genome stability.

Seung H Choi, Thomas F Martinez, Seongjae Kim, Cynthia Donaldson, Maxim N Shokhirev, Alan Saghatelian, Katherine A Jones

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 81 citations in OpenAlex.

  1. Trial
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  5. Article
  6. CDK12 and CDK13 in oncology: from RNA regulation to therapeutic targeting.Cellular oncology (Dordrecht, Netherlands) · 2026
    Review
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  19. bioRxiv : the preprint server for biology · 2024
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Seung H ChoiRegulatory Biology Laboratory, The Salk Institute for Biological Studies, La Jolla, California 92037, USA.
Thomas F MartinezClayton Foundation Laboratory for Peptide Biology, The Salk Institute for Biological Studies, La Jolla, California 92037, USA.
Seongjae KimMolecular Neurobiology Laboratory, The Salk Institute for Biological Studies, La Jolla, California 92037, USA.
Cynthia DonaldsonClayton Foundation Laboratory for Peptide Biology, The Salk Institute for Biological Studies, La Jolla, California 92037, USA.
Maxim N ShokhirevRazavi Newman Integrative Genomics and Bioinformatics Core, The Salk Institute for Biological Studies, La Jolla, California 92037, USA.
Alan SaghatelianClayton Foundation Laboratory for Peptide Biology, The Salk Institute for Biological Studies, La Jolla, California 92037, USA.
Katherine A JonesRegulatory Biology Laboratory, The Salk Institute for Biological Studies, La Jolla, California 92037, USA.
Salk Institute for Biological Studies · US

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Ye Zheng · 1985 to 2026
$82.8M
The Discovery of Human Peptide Encoding GenesR01GM102491 · NIGMS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI O'SHEA, CLODAGH, SAGHATELIAN, ALAN · 2012 to 2025
$5.5M
Mechanism of beta-catenin and APC-regulated transcription of Wnt target genesR01CA125535 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI JONES, KATHERINE A · 2007 to 2017
$4.5M
Patterning of ciliated epithelia by mechanical strainR01HD092215 · NICHD · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI KINTNER, CHRISTOPHER ROBERT · 2017 to 2021
$2.0M
An Integrative Approach for the Annotation of Functional smORFsF32GM123685 · NIGMS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI MARTINEZ, THOMAS FARID · 2017 to 2018
$116k
NCI NIH HHS P30 CA014195NCI NIH HHS R01 CA125535NICHD NIH HHS R01 HD092215NIGMS NIH HHS F32 GM123685NIGMS NIH HHS R01 GM102491
6 · The paper itself

Abstract

The RNA polymerase II (RNAPII) C-terminal domain kinase, CDK12, regulates genome stability, expression of DNA repair genes, and cancer cell resistance to chemotherapy and immunotherapy. In addition to its role in mRNA biosynthesis of DNA repair genes, we show here that CDK12 phosphorylates the mRNA 5' cap-binding repressor, 4E-BP1, to promote translation of mTORC1-dependent mRNAs. In particular, we found that phosphorylation of 4E-BP1 by mTORC1 (T37 and T46) facilitates subsequent CDK12 phosphorylation at two Ser-Pro sites (S65 and T70) that control the exchange of 4E-BP1 with eIF4G at the 5' cap of

Indexed as

Adaptor Proteins, Signal TransducingCell Cycle ProteinsCell Line, TumorCheckpoint Kinase 1Cyclin-Dependent KinasesCyclinsEukaryotic Initiation Factor-4GGene Expression Regulation, NeoplasticGenomic InstabilityHumansMechanistic Target of Rapamycin Complex 1MitosisPhosphoproteinsPhosphorylationProtein BindingAdaptor Proteins, Signal TransducingCCNK protein, humanCDK12 protein, humanCell Cycle ProteinsCheckpoint Kinase 1CHEK1 protein, humanCyclin-Dependent KinasesCyclinsEIF4EBP1 protein, humanEIF4G1 protein, humanEukaryotic Initiation Factor-4GMechanistic Target of Rapamycin Complex 1Phosphoproteins4E-BP1CDK12chromosome misalignmentgenome stabilitymTORC1RNAPII CTD kinasetranslation

Identifiers

PMID30819820
PMCPMC6446539
OpenAlexW2920393317

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.