Evidence map›Paper›PMID 30819771›Full record

ArticleAJNR. American journal of neuroradiology2019

Accurate Patient-Specific Machine Learning Models of Glioblastoma Invasion Using Transfer Learning.

L S Hu, H Yoon, J M Eschbacher, L C Baxter, A C Dueck, A Nespodzany, K A Smith, P Nakaji, Y Xu, L Wang and 21 more

Abstract read
In one paragraph

Article in AJNR. American journal of neuroradiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Knowledge-Informed Machine Learning for Cancer Diagnosis and Prognosis: A Review.IEEE transactions on automation science and engineering : a publication of the IEEE Robotics and Automation Society · 2025
    Article
  3. Review
  4. Weakly-Supervised Transfer Learning with Application in Precision Medicine.IEEE transactions on automation science and engineering : a publication of the IEEE Robotics and Automation Society · 2024
    Article
  5. Article
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  11. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors.

L S HuFrom the Department of Radiology (L.S.H., J.M.H., J.R.M., T.W., J.L.) Hu.Leland@Mayo.Edu.ORCID 0000-0001-9282-7619
H YoonArizona State University (H.Y., Y.X., L.W., T.W., J.L.), Tempe, Arizona.ORCID 0000-0002-6371-7055
J M EschbacherDepartments of Pathology (J.M.E.).ORCID 0000-0002-2599-0819
L C BaxterRadiology (L.C.B., A.N., J.P.K.).ORCID 0000-0002-3971-863X
A C DueckDepartment of Biostatistics (A.C.D.), Mayo Clinic in Arizona, Scottsdale, Arizona.ORCID 0000-0002-9912-1085
A NespodzanyRadiology (L.C.B., A.N., J.P.K.).ORCID 0000-0002-3251-815X
K A SmithNeurosurgery (K.A.S., P.N., N.S.).ORCID 0000-0003-4645-6313
P NakajiNeurosurgery (K.A.S., P.N., N.S.).ORCID 0000-0001-6677-2925
Y XuArizona State University (H.Y., Y.X., L.W., T.W., J.L.), Tempe, Arizona.ORCID 0000-0002-6221-8676
L WangArizona State University (H.Y., Y.X., L.W., T.W., J.L.), Tempe, Arizona.ORCID 0000-0002-0475-004X
J P KarisRadiology (L.C.B., A.N., J.P.K.).ORCID 0000-0003-4181-4185
A J Hawkins-DaarudPrecision Neurotherapeutics Lab (A.J.H.-D., K.W.S., P.R.J, B.R.B., K.R.S.).ORCID 0000-0002-6391-4155
K W SingletonPrecision Neurotherapeutics Lab (A.J.H.-D., K.W.S., P.R.J, B.R.B., K.R.S.).ORCID 0000-0002-9969-8474
P R JacksonPrecision Neurotherapeutics Lab (A.J.H.-D., K.W.S., P.R.J, B.R.B., K.R.S.).ORCID 0000-0002-8424-4007
B J AnderiesDepartment of Neurosurgery (B.J.A., B.R.B., R.S.Z., M.G.S., P.E.K., C.K., K.R.S.).ORCID 0000-0003-3302-3092
B R BendokPrecision Neurotherapeutics Lab (A.J.H.-D., K.W.S., P.R.J, B.R.B., K.R.S.).ORCID 0000-0002-3506-3074
R S ZimmermanDepartment of Neurosurgery (B.J.A., B.R.B., R.S.Z., M.G.S., P.E.K., C.K., K.R.S.).ORCID 0000-0002-9911-6817
C QuarlesNeuroimaging Research (C.Q.), Barrow Neurological Institute, Phoenix, Arizona.ORCID 0000-0002-1731-0940
A B Porter-UmphreyDepartment of Neuro-Oncology (A.B.P.-U., M.M.M., A.S.).ORCID 0000-0003-0666-1320
M M MrugalaDepartment of Neuro-Oncology (A.B.P.-U., M.M.M., A.S.).ORCID 0000-0002-7073-8217
A SharmaDepartment of Neuro-Oncology (A.B.P.-U., M.M.M., A.S.).ORCID 0000-0002-4331-5526
J M HoxworthFrom the Department of Radiology (L.S.H., J.M.H., J.R.M., T.W., J.L.).ORCID 0000-0002-7179-5846
M G SatturDepartment of Neurosurgery (B.J.A., B.R.B., R.S.Z., M.G.S., P.E.K., C.K., K.R.S.).ORCID 0000-0002-2404-3780
N SanaiNeurosurgery (K.A.S., P.N., N.S.).ORCID 0000-0002-5581-0516
P E KoulemberisDepartment of Neurosurgery (B.J.A., B.R.B., R.S.Z., M.G.S., P.E.K., C.K., K.R.S.).ORCID 0000-0001-6132-5878
C KrishnaDepartment of Neurosurgery (B.J.A., B.R.B., R.S.Z., M.G.S., P.E.K., C.K., K.R.S.).ORCID 0000-0001-9394-5852
J R MitchellFrom the Department of Radiology (L.S.H., J.M.H., J.R.M., T.W., J.L.).ORCID 0000-0002-2340-4708
T WuFrom the Department of Radiology (L.S.H., J.M.H., J.R.M., T.W., J.L.).ORCID 0000-0002-0529-7048
N L TranDepartment of Cancer Biology (N.L.T.), Mayo Clinic in Arizona, Phoenix, Arizona.ORCID 0000-0003-0908-9964
K R SwansonPrecision Neurotherapeutics Lab (A.J.H.-D., K.W.S., P.R.J, B.R.B., K.R.S.).ORCID 0000-0002-2464-6119
J LiFrom the Department of Radiology (L.S.H., J.M.H., J.R.M., T.W., J.L.).ORCID 0000-0001-7028-3681

Funding

Targeted MV-CEA as a Potent Antitumor Agent against GBMP50CA108961 · NCI · MAYO CLINIC ROCHESTER · PI O'NEILL, BRIAN PATRICK · 2004 to 2015
$22.5M
Quantifying Multiscale Competitive Landscapes of Clonal Diversity in GlioblastomaU01CA220378 · NCI · MAYO CLINIC ARIZONA · PI HU, LELAND, SWANSON, KRISTIN R · 2017 to 2021
$4.3M
MRI Assessment of Tumor Perfusion, Permeability and CellularityR01CA158079 · NCI · VANDERBILT UNIVERSITY · PI QUARLES, CHRISTOPHER CHAD · 2011 to 2021
$3.5M
Multi-site Validation and Application of a Consensus DSC MRI ProtocolR01CA221938 · NCI · ST. JOSEPH'S HOSPITAL AND MEDICAL CENTER · PI BOXERMAN, JERROLD L, HU, LELAND · 2018 to 2020
$738k
MRI-based mapping of regional genomic diversity in GlioblastomaR21NS082609 · NINDS · MAYO CLINIC ARIZONA · PI HU, LELAND · 2013 to 2014
$525k
NCI NIH HHS P50 CA108961NCI NIH HHS R01 CA158079NCI NIH HHS R01 CA221938NCI NIH HHS U01 CA220378NINDS NIH HHS R21 NS082609
6 · The paper itself

Abstract

background and purposeMR imaging-based modeling of tumor cell density can substantially improve targeted treatment of glioblastoma. Unfortunately, interpatient variability limits the predictive ability of many modeling approaches. We present a transfer learning method that generates individualized patient models, grounded in the wealth of population data, while also detecting and adjusting for interpatient variabilities based on each patient's own histologic data. MATERIALS AND

methodsWe recruited patients with primary glioblastoma undergoing image-guided biopsies and preoperative imaging, including contrast-enhanced MR imaging, dynamic susceptibility contrast MR imaging, and diffusion tensor imaging. We calculated relative cerebral blood volume from DSC-MR imaging and mean diffusivity and fractional anisotropy from DTI. Following image coregistration, we assessed tumor cell density for each biopsy and identified corresponding localized MR imaging measurements. We then explored a range of univariate and multivariate predictive models of tumor cell density based on MR imaging measurements in a generalized one-model-fits-all approach. We then implemented both univariate and multivariate individualized transfer learning predictive models, which harness the available population-level data but allow individual variability in their predictions. Finally, we compared Pearson correlation coefficients and mean absolute error between the individualized transfer learning and generalized one-model-fits-all models.

resultsTumor cell density significantly correlated with relative CBV (

conclusionsTransfer learning significantly improves predictive modeling performance for quantifying tumor cell density in glioblastoma.

Indexed as

Machine LearningAdultAgedBrain NeoplasmsFemaleGlioblastomaHumansMagnetic Resonance ImagingMaleMiddle AgedNeuroimaging

Identifiers

PMID30819771
PMCPMC6474354

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.