Evidence map›Paper›PMID 30819119›Full record

ArticleBMC cancer2019

IL1A polymorphisms is a risk factor for colorectal cancer in Chinese Han population: a case control study.

Hong Ji, Le Lu, Jingjing Huang, Yang Liu, Binchao Zhang, Hui Tang, Dangze Sun, Yafei Zhang, Hao Shang, Yiming Li and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Hong JiDepartment of General Surgery, The Second Affiliated Hospital, Xi'an Jiaotong University School of Medicine, #157, West fifth Road, Xi'an, 710004, Shaanxi, People's Republic of China.
Le LuDepartment of General Surgery, The Second Affiliated Hospital, Xi'an Jiaotong University School of Medicine, #157, West fifth Road, Xi'an, 710004, Shaanxi, People's Republic of China.
Jingjing HuangDepartment of General Surgery, The Second Affiliated Hospital, Xi'an Jiaotong University School of Medicine, #157, West fifth Road, Xi'an, 710004, Shaanxi, People's Republic of China.
Yang LiuDepartment of Surgery, The People's Hospital of Zhenba Country, Hanzhong, 723600, Shaanxi, People's Republic of China.
Binchao ZhangDepartment of General Surgery, The People's Hospital of Shangzhou District, Shangluo, 726000, Shaanxi, People's Republic of China.
Hui TangDepartment of General Surgery, The Second Affiliated Hospital, Xi'an Jiaotong University School of Medicine, #157, West fifth Road, Xi'an, 710004, Shaanxi, People's Republic of China.
Dangze SunDepartment of General Surgery, The Second Affiliated Hospital, Xi'an Jiaotong University School of Medicine, #157, West fifth Road, Xi'an, 710004, Shaanxi, People's Republic of China.
Yafei ZhangDepartment of General Surgery, The Second Affiliated Hospital, Xi'an Jiaotong University School of Medicine, #157, West fifth Road, Xi'an, 710004, Shaanxi, People's Republic of China.
Hao ShangDepartment of General Surgery, The Second Affiliated Hospital, Xi'an Jiaotong University School of Medicine, #157, West fifth Road, Xi'an, 710004, Shaanxi, People's Republic of China.
Yiming LiDepartment of General Surgery, The Second Affiliated Hospital, Xi'an Jiaotong University School of Medicine, #157, West fifth Road, Xi'an, 710004, Shaanxi, People's Republic of China.
Hongwei LuDepartment of General Surgery, The Second Affiliated Hospital, Xi'an Jiaotong University School of Medicine, #157, West fifth Road, Xi'an, 710004, Shaanxi, People's Republic of China. lhwdoc@163.com.
Second Affiliated Hospital of Xi'an Jiaotong University · CNHanzhong People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundColorectal cancer (CRC) is one of the most common cancers worldwide, and genetic variations exert distinct roles in its pathogenesis. Single nucleotide polymorphisms (SNPs) in interleukin 1 alpha (IL1A) were reported to be correlated to the susceptibility of diverse cancers. The aim of this study was to assess the association of IL1A SNPs with the risk of colorectal cancer in a Chinese Han population.

methodsTo evaluate the correlation between IL1A polymorphisms and CRC risk, Agena MassARRAY platform was used for genotype determination among 248 CRC patients and 463 controls. The relationships between IL1A variants and CRC susceptibility were examined by logistic regression analysis. Stratified analysis was conducted for the association detection in males and females. Haplotype construction and analysis were applied to evaluate the potential relationship between the genetic block and the risk of CRC. SNP functional exploration was performed with available bioinformatics datasets.

resultsAfter adjusting for age and gender, the "AA" genotype of rs2856838 exhibited a risk association with colorectal cancer in the recessive model (adjusted OR = 1.98, 95% CI: 1.05-3.72, p = 0.036). With stratified analysis, the recessive models of rs3783550 (OR = 2.17, 95% CI: 1.03-4.60, p = 0.043), rs2856838 (OR = 2.58, 95% CI: 1.13-5.87, p = 0.024), rs1609682 (OR = 2.20, 95% CI: 1.04-4.65, p = 0.040), and rs3783521 (OR = 2.13, 95% CI: 1.01-4.49, p = 0.048) revealed significant relationships between these variants and an increased CRC risk only in females. Bioinformatics analysis also revealed the putative functions of the selected SNPs.

conclusionsThis study demonstrated that rs2856838 could influence the susceptibility to CRC in Chinese Han population from northwest China. IL1A variants rs3783550, rs2856838, rs1609682, and rs3783521 were associated with CRC risk only in females.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAdultAgedAllelesCase-Control StudiesChinaChromosome MappingColorectal NeoplasmsFemaleGene FrequencyGenotypeHaplotypesHumansInheritance PatternsInterleukin-1alphaIL1A protein, humanInterleukin-1alphaChinese Han populationColorectal cancerIL1ASingle-nucleotide polymorphismsStratification analysis

Identifiers

PMID30819119
PMCPMC6394039
OpenAlexW2947935911

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.