Evidence map›Paper›PMID 30818774›Full record

ArticleAntibiotics (Basel, Switzerland)2019

Mapping and Analysing Potential Sources and Transmission Routes of Antimicrobial Resistant Organisms in the Environment using Geographic Information Systems-An Exploratory Study.

Carlos Chique, John Cullinan, Brigid Hooban, Dearbhaile Morris

Abstract read
In one paragraph

Article in Antibiotics (Basel, Switzerland), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Carlos ChiqueDiscipline of Economics and Health Economics and Policy Analysis Centre, National University of Ireland, Galway, H91 CF50, Ireland. carlos.chique@nuigalway.ie.ORCID 0000-0003-1139-0633
John CullinanDiscipline of Economics and Health Economics and Policy Analysis Centre, National University of Ireland, Galway, H91 CF50, Ireland. john.cullinan@nuigalway.ie.
Brigid HoobanDiscipline of Bacteriology, School of Medicine and Centre for Health from Environment, Ryan Institute, National University of Ireland, Galway, H91 CF50, Ireland. b.hooban1@nuigalway.ie.
Dearbhaile MorrisDiscipline of Bacteriology, School of Medicine and Centre for Health from Environment, Ryan Institute, National University of Ireland, Galway, H91 CF50, Ireland. dearbhaile.morris@nuigalway.ie.ORCID 0000-0002-9942-7455

Funding

Environmental Protection Agency 2017-HW-LS-1
6 · The paper itself

Abstract

Antimicrobial resistance (AMR) is one of the leading threats to human health worldwide. The identification of potential sources of antimicrobial resistant organisms (AROs) and their transmission routes in the environment is important for improving our understanding of AMR and to inform and improve policy and monitoring systems, as well as the identification of suitable sampling locations and potential intervention points. This exploratory study uses geographic information systems (GIS) to analyse the spatial distribution of likely ARO sources and transmission routes in four local authority areas (LAAs) in Ireland. A review of relevant spatial data in each LAA, grouped into themes, and categorised into sources and transmission routes, was undertaken. A range of GIS techniques was used to extract, organise, and collate the spatial data into final products in the form of thematic maps for visual and spatial analysis. The results highlight the location of 'clusters' at increased risk of harbouring AMR in each LAA. They also demonstrate the relevance of aquatic transmission routes for ARO mobility and risk of human exposure. The integration of a GIS approach with expert knowledge of AMR is shown to be a useful tool to gain insights into the spatial dimension of AMR and to guide sampling campaigns and intervention points.

Indexed as

antimicrobial resistanceantimicrobial resistant organismsGISIrelandsourcestransmission routes

Identifiers

PMID30818774
PMCPMC6466594

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.