Evidence map›Paper›PMID 30816279›Full record

ArticleScientific reports2019

CRISPR-mediated activation of endogenous BST-2/tetherin expression inhibits wild-type HIV-1 production.

Yanzhao Zhang, Seiya Ozono, Weitong Yao, Minoru Tobiume, Shoji Yamaoka, Satoshi Kishigami, Hideaki Fujita, Kenzo Tokunaga

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
  3. A CRISPR-Cas Cure for HIV/AIDS.International journal of molecular sciences · 2023
    Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. The impact of bone marrow stromal antigen-2 (BST2) gene variants on HIV-1 control in black South African individuals.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2020
    Article
  14. Review
  15. Dead Cas Systems: Types, Principles, and Applications.International journal of molecular sciences · 2019
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Yanzhao ZhangDepartment of Pathology, National Institute of Infectious Diseases, Tokyo, 162-8640, Japan.
Seiya OzonoDepartment of Pathology, National Institute of Infectious Diseases, Tokyo, 162-8640, Japan.
Weitong YaoDepartment of Pathology, National Institute of Infectious Diseases, Tokyo, 162-8640, Japan.
Minoru TobiumeDepartment of Pathology, National Institute of Infectious Diseases, Tokyo, 162-8640, Japan.
Shoji YamaokaDepartment of Molecular Virology, Tokyo Medical and Dental University, Tokyo, 113-8519, Japan.
Satoshi KishigamiFaculty of Life and Environmental Sciences, University of Yamanashi, Yamanashi, 400-8510, Japan.
Hideaki FujitaFaculty of Pharmaceutical Sciences, Nagasaki International University, Nagasaki, 859-3298, Japan.
Kenzo TokunagaDepartment of Pathology, National Institute of Infectious Diseases, Tokyo, 162-8640, Japan. tokunaga@nih.go.jp.
National Institute of Infectious Diseases · JPNagasaki International University · JPTokyo Medical and Dental University · JPUniversity of Yamanashi · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The CRISPR technology not only can knock out target genes by using the RNA-guided Cas9 nuclease but also can activate their expression when a nuclease-deficient Cas9 (dCas9) is employed. Using the latter function, we here show the effect of the CRISPR-mediated pinpoint activation of endogenous expression of BST-2 (also known as tetherin), a virus restriction factor with a broad antiviral spectrum. Single-guide RNA (sgRNA) sequences targeting the BST-2 promoter were selected by promoter assays. Potential sgRNAs and dCas9 fused to the VP64 transactivation domain, along with an accessory transcriptional activator complex, were introduced into cells by lentiviral transduction. Increased expression of BST-2 mRNA in transduced cells was confirmed by real-time RT-PCR. Cells in which BST-2 expression was highly enhanced showed the effective inhibition of HIV-1 production and replication even in the presence of the viral antagonist Vpu against BST-2. These findings confirm that the physiological stoichiometry between host restriction factors and viral antagonists may determine the outcome of the battle with viruses.

Indexed as

Transcriptional ActivationVirus ReplicationAntigens, CDBone Marrow Stromal Antigen 2Clustered Regularly Interspaced Short Palindromic RepeatsGene ExpressionGene TargetingGPI-Linked ProteinsHEK293 CellsHeLa CellsHIV-1HIV InfectionsHost-Pathogen InteractionsHumansRNA, Guide, CRISPR-Cas SystemsAntigens, CDBone Marrow Stromal Antigen 2BST2 protein, humanGPI-Linked ProteinsRNA, Guide, CRISPR-Cas Systems

Identifiers

PMID30816279
PMCPMC6395588
OpenAlexW2918864126

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.