ArticleScientific reports2019
Metagenome-assembled genomes provide new insight into the microbial diversity of two thermal pools in Kamchatka, Russia.
Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 45 papers.
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Who cites it
45 citing papers in PubMed, 107 citations in OpenAlex.
- CarpeDeam: a de novo metagenome assembler for heavily damaged ancient datasets.Genome biology · 2025Article
- Land-use legacies shape soil microbial communities and nutrient cycling functions in rotational shifting cultivation fields of Northern Thailand.Microbial ecology · 2025Article
- Metagenome-Assembled Genomes (MAGs): Advances, Challenges, and Ecological Insights.Microorganisms · 2025Review
- Recovery of 679 metagenome-assembled genomes from different soil depths along a precipitation gradient.Scientific data · 2025Article
- Antarctic Geothermal Soils Exhibit an Absence of Regional Habitat Generalist Microorganisms.Environmental microbiology · 2025Article
- Environmental activity-based protein profiling for function-driven enzyme discovery from natural communities.Environmental microbiome · 2024Article
- Disentangling direct vs indirect effects of microbiome manipulations in a habitat-forming marine holobiont.NPJ biofilms and microbiomes · 2024Article
- Exploration of genes encoding KEGG pathway enzymes in rhizospheric microbiome of the wild plant Abutilon fruticosum.AMB Express · 2024Article
- Microbial community response to hydrocarbon exposure in iron oxide mats: an environmental study.Frontiers in microbiology · 2024Article
- Radiation impacts gene redundancy and biofilm regulation of cryoconite microbiomes in Northern Hemisphere glaciers.Microbiome · 2023Article
- Metagenome sequencing and recovery of 444 metagenome-assembled genomes from the biofloc aquaculture system.Scientific data · 2023Article
- Article
- Wood-Ljungdahl pathway found in novel marine Korarchaeota groups illuminates their evolutionary history.mSystems · 2023Article
- Review
- Baseline metagenome-assembled genome (MAG) data of Sikkim hot springs from Indian Himalayan geothermal belt (IHGB) showcasing its potential CAZymes, and sulfur-nitrogen metabolic activity.World journal of microbiology & biotechnology · 2023Article
- Decoding the microbial universe with metagenomics: a brief insight.Frontiers in genetics · 2023Review
- A metagenomic insight into the microbiomes of geothermal springs in the Subantarctic Kerguelen Islands.Scientific reports · 2022Article
- Genome-centric insight into metabolically active microbial population in shallow-sea hydrothermal vents.Microbiome · 2022Article
- Millennia-old coral holobiont DNA provides insight into future adaptive trajectories.Molecular ecology · 2022Article
- Complete gammaproteobacterial endosymbiont genome assembly from a seep tubeworm Lamellibrachia satsuma.Journal of microbiology (Seoul, Korea) · 2022Article
Corrections and comments
- Erratum issued
Authors and funding
4 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Culture-independent methods have contributed substantially to our understanding of global microbial diversity. Recently developed algorithms to construct whole genomes from environmental samples have further refined, corrected and revolutionized understanding of the tree of life. Here, we assembled draft metagenome-assembled genomes (MAGs) from environmental DNA extracted from two hot springs within an active volcanic ecosystem on the Kamchatka peninsula, Russia. This hydrothermal system has been intensively studied previously with regard to geochemistry, chemoautotrophy, microbial isolation, and microbial diversity. We assembled genomes of bacteria and archaea using DNA that had previously been characterized via 16S rRNA gene clone libraries. We recovered 36 MAGs, 29 of medium to high quality, and inferred their placement in a phylogenetic tree consisting of 3,240 publicly available microbial genomes. We highlight MAGs that were taxonomically assigned to groups previously underrepresented in available genome data. This includes several archaea (Korarchaeota, Bathyarchaeota and Aciduliprofundum) and one potentially new species within the bacterial genus Sulfurihydrogenibium. Putative functions in both pools were compared and are discussed in the context of their diverging geochemistry. This study adds comprehensive information about phylogenetic diversity and functional potential within two hot springs in the caldera of Kamchatka.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.