Evidence map›Paper›PMID 30816137›Full record

ArticleScientific reports2019

Comprehensive sequencing of the myocilin gene in a selected cohort of severe primary open-angle glaucoma patients.

Luke O'Gorman, Angela J Cree, Daniel Ward, Helen L Griffiths, Roshan Sood, Alastair K Denniston, Jay E Self, Sarah Ennis, Andrew J Lotery, Jane Gibson

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Luke O'GormanHuman Development and Health, Faculty of Medicine, University of Southampton, Southampton, UK.ORCID 0000-0003-1653-4704
Angela J CreeClinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK.ORCID 0000-0002-1987-8900
Daniel WardMolecular Genetics Wessex Regional Genetics Laboratory, Salisbury NHS Foundation Trust, Salisbury, UK.ORCID 0000-0003-2614-1023
Helen L GriffithsClinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK.
Roshan SoodBiological Sciences, Faculty of Natural and Environmental Sciences, University of Southampton, Southampton, UK.
Alastair K DennistonDepartment of Ophthalmology, University Hospitals Birmingham NHS Foundation Trust, Birmingham, UK.ORCID 0000-0001-7849-0087
Jay E SelfClinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK.
Sarah EnnisHuman Genetics & Genomic Medicine, Faculty of Medicine, University of Southampton, Southampton, UK. se@soton.ac.uk.
Andrew J LoteryClinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK.ORCID 0000-0001-5541-4305
Jane GibsonBiological Sciences, Faculty of Natural and Environmental Sciences, University of Southampton, Southampton, UK.ORCID 0000-0002-0973-8285
University of Southampton · GBUniversity Hospital Southampton NHS Foundation Trust · GBUniversity Hospitals Birmingham NHS Foundation Trust · GBWessex Regional Genetics Laboratory · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Primary open-angle glaucoma (POAG) is the most common form of glaucoma, prevalent in approximately 1-2% of Caucasians in the UK over the age of 40. It is characterised by an open anterior chamber angle, raised intraocular pressure (IOP) and optic nerve damage leading to loss of sight. The myocilin gene (MYOC) is the most common glaucoma-causing gene, accounting for ~2% of British POAG cases. 358 patients were selected for next generation sequencing (NGS) with the following selection criteria: Caucasian ethnicity, intraocular pressure (IOP) 21-40 mm Hg, cup:disc ratio ≥0.6 and visual field mean deviation ≤-3. The entire MYOC gene (17,321 bp) was captured including the promoter, introns, UTRs and coding exons. We identify 12 exonic variants (one stop-gain, five missense and six synonymous variants), two promoter variants, 133 intronic variants, two 3' UTR variants and 23 intergenic variants. Four known or predicted pathogenic exonic variants (p.R126W, p.K216K, p.Q368* and p.T419A) were identified across 11 patients, which accounts for 3.07% of this POAG cohort. This is the first time that the entire region of MYOC has been sequenced and variants reported for a cohort of POAG patients.

Indexed as

Genomic Structural VariationGlaucoma, Open-AngleAdultAgedAged, 80 and overCohort StudiesCytoskeletal ProteinsExonsEye ProteinsGlycoproteinsHigh-Throughput Nucleotide SequencingHumansIntronsMiddle AgedMyocilinPromoter Regions, GeneticCytoskeletal ProteinsEye ProteinsGlycoproteinsMyocilin

Identifiers

PMID30816137
PMCPMC6395666
OpenAlexW2916848366

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.