Evidence map›Paper›PMID 30815718›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2019

Bulked segregant RNA-sequencing (BSR-seq) identified a novel rare allele of eIF4E effective against multiple isolates of BaYMV/BaMMV.

Lijie Shi, Congcong Jiang, Qiang He, Antje Habekuß, Frank Ordon, Haiye Luan, Huiquan Shen, Jun Liu, Zongyun Feng, Jing Zhang and 1 more

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
7.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 44 citations in OpenAlex.

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  10. Review
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  12. Induced mutation in ELONGATED HYPOCOTYL5 abolishes anthocyanin accumulation in the hypocotyl of pepper.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  13. Mutation of barleyFrontiers in plant science · 2022
    Article
  14. High-Resolution Mapping ofFrontiers in plant science · 2022
    Article
  15. Article
  16. Delineating the elusive BaMMV resistance geneMolecular breeding : new strategies in plant improvement · 2021
    Article
  17. Article
  18. Review
  19. Review
  20. High-resolution mapping of Rym14TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Lijie Shi *Institute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China.
Congcong Jiang *Institute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China.
Qiang HeInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China.
Antje HabekußFederal Research Centre for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, Julius Kuehn-Institute (JKI), 06484, Quedlinburg, Germany.
Frank OrdonFederal Research Centre for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, Julius Kuehn-Institute (JKI), 06484, Quedlinburg, Germany.
Haiye LuanInstitute of Agricultural Sciences of Coastal Area Jiangsu, Yancheng, 224002, China.
Huiquan ShenInstitute of Agricultural Sciences of Coastal Area Jiangsu, Yancheng, 224002, China.
Jun LiuInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China.
Zongyun FengCollege of Agronomy, Sichuan Agricultural University, Chengdu, 611130, China.
Jing ZhangInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China.
Ping YangInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China. yangping@caas.cn.ORCID http://orcid.org/0000-0002-6977-8449
Chinese Academy of Agricultural Sciences · CNJulius Kühn-Institut · DESichuan Agricultural University · CN

Funding

Chinese Academy of Agricultural Sciences S2018PY04Chinese Academy of Agricultural Sciences S2018YC01German Ministry of Education and Research FKZ 0315708National Key R&D Program of China 2018YFD1000700National Key R&D Program of China 2018YFD1000702
6 · The paper itself

Abstract

key messageA novel rare allele of the barley host factor gene eIF4E for BaMMV/BaYMV infection was identified in an Iranian landrace that showed broad resistance to barley yellow mosaic virus disease, and molecular markers facilitating efficient selection were developed. The soil-borne yellow mosaic virus disease caused by different strains of barley yellow mosaic virus (BaYMV) and barley mild mosaic virus (BaMMV) is a major threat to winter barley (Hordeum vulgare) production in Europe and East Asia. However, the exploration of resistant germplasm or casual genes for barley breeding is rather limited in relation to the rapid diversification of viral strains. Here, we identified an Iranian barley landrace 'HOR3298,' which represented complete resistance to BaYMV and BaMMV. In contrast to rym4 and rym5, which act as the predominant source in Europe and East Asia for breeding resistant cultivars over decades and which have been overcome by several virulent isolates, this landrace showed broad-spectrum resistance to multiple isolates of BaYMV/BaMMV in the fields of Germany and China. By employment of bulked segregant RNA sequencing, test for allelism, and haplotype analysis, a recessive resistance gene in 'HOR3298' was genetically mapped coincident with the host factor eukaryotic translation initiation factor 4E (eIF4E, causal gene of rym4 and rym5). The eIF4E

Indexed as

Genetic MarkersDisease ResistanceEukaryotic Initiation Factor-4EGene FrequencyHigh-Throughput Nucleotide SequencingHordeumPhenotypePlant DiseasesPotyviridaeEukaryotic Initiation Factor-4EGenetic Markers

Identifiers

PMID30815718
OpenAlexW2918187142

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.