Evidence map›Paper›PMID 30815141›Full record

ArticleAMIA ... Annual Symposium proceedings. AMIA Symposium2018

Automated Population of an i2b2 Clinical Data Warehouse using FHIR.

Harold R Solbrig, Na Hong, Shawn N Murphy, Guoqian Jiang

Abstract read
In one paragraph

Article in AMIA ... Annual Symposium proceedings. AMIA Symposium, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Clinical Data Warehousing: A Scoping Review.Journal of the Society for Clinical Data Management · 2024
    Article
  4. Article
  5. HL7 FHIR-based tools and initiatives to support clinical research: a scoping review.Journal of the American Medical Informatics Association : JAMIA · 2022
    Article
  6. Article
  7. Review
  8. Exploring JSON-LD as an Executable Definition of FHIR RDF to Enable.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2020
    Article
  9. Article
  10. ITCBio, a Clinical and Translational Research Platform.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Harold R SolbrigDepartment of Health Sciences Research, Mayo Clinic, Rochester MN, USA.
Na HongDepartment of Health Sciences Research, Mayo Clinic, Rochester MN, USA.
Shawn N MurphyLaboratory of Computer Science, Massachusetts General Hospital, Boston, MA, USA.
Guoqian JiangDepartment of Health Sciences Research, Mayo Clinic, Rochester MN, USA.

Funding

Tools for standardizing clinical research metadata using HL7 FHIRU01HG009450 · NHGRI · MAYO CLINIC ROCHESTER · PI JIANG, GUOQIAN · 2016 to 2018
$1.4M
caCDE-QA: A Quality Assurance Platform for Cancer Study Common Data ElementsU01CA180940 · NCI · MAYO CLINIC ROCHESTER · PI JIANG, GUOQIAN · 2014 to 2016
$1.1M
NCI NIH HHS U01 CA180940NHGRI NIH HHS U01 HG009450
6 · The paper itself

Abstract

HL7 Fast Healthcare Information Resources (FHIR) is rapidly becoming the de-facto standard for the exchange of clinical and healthcare related information. Major EHR vendors and healthcare providers are actively developing transformations between existing EHR databases and their corresponding FHIR representation. Many of these organizations are concurrently creating a second set of transformations from the same sources into integrated data repositories (IDRs). Considerable cost savings could be realized and overall quality could be improved were it possible to transformation primary FHIR EHR data directly into an IDR. We developed a FHIR to i2b2 transformation toolkit and evaluated the viability of such an approach.

Indexed as

Datasets as TopicData WarehousingHealth Level SevenBiological OntologiesElectronic Health RecordsHealth Information InteroperabilityHumansSoftware

Identifiers

PMID30815141
PMCPMC6371332

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.