Evidence map›Paper›PMID 30815118›Full record

ArticleAMIA ... Annual Symposium proceedings. AMIA Symposium2018

Detecting the Presence of an Individual in Phenotypic Summary Data.

Yongtai Liu, Zhiyu Wan, Weiyi Xia, Murat Kantarcioglu, Yevgeniy Vorobeychik, Ellen Wright Clayton, Abel Kho, David Carrell, Bradley A Malin

Registry-linked trialAbstract read
In one paragraph

Article in AMIA ... Annual Symposium proceedings. AMIA Symposium, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05277116 (The Electronic Medical Records and GEnomics), which is not on this map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05277116 naactive not recruitingnot on this mapstarted 2022, after this paper: background citation

The Electronic Medical Records and GEnomics (eMERGE) Network Genomic Risk Assessment

TypeinterventionalSponsorVanderbilt University Medical CenterRan2022 to 2030Enrolled26,877ConditionsGenetic DiseaseArmsGenome Informed Risk Assessment (GIRA) report
3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Biomedical Research Cohort Membership Disclosure on Social Media.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yongtai LiuVanderbilt University, Nashville, Tennessee, USA.
Zhiyu WanVanderbilt University, Nashville, Tennessee, USA.
Weiyi XiaVanderbilt University, Nashville, Tennessee, USA.
Murat KantarciogluUniversity of Texas at Dallas, Richardson, Texas, USA.
Yevgeniy VorobeychikVanderbilt University, Nashville, Tennessee, USA.
Ellen Wright ClaytonVanderbilt University, Nashville, Tennessee, USA.
Abel KhoNorthwestern University, Chicago, Illinois, USA.
David CarrellKaiser Permanente Washington Health Research Institute, Seattle, Washington, USA.
Bradley A MalinVanderbilt University, Nashville, Tennessee, USA.

Funding

Genetic Privacy and Identity in Community Settings - GetPreCiSeRM1HG009034 · NHGRI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI CLAYTON, ELLEN WRIGHT, MALIN, BRADLEY A. · 2016 to 2024
$8.3M
The Electronic Medical Records and Genomics (eMERGE) Network Phase III Coordinating Center (U01)U01HG008701 · NHGRI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PETERSON, JOSEPH F. · 2015 to 2019
$7.1M
eMERGE Coordinating Center - Administrative SupplementU01HG006385 · NHGRI · VANDERBILT UNIVERSITY · PI HARRIS, PAUL A. · 2011 to 2014
$5.4M
Vanderbilt Genome Electronic Records ProjectU01HG006378 · NHGRI · VANDERBILT UNIVERSITY · PI RODEN, DAN M · 2011 to 2014
$4.0M
A Risk Management Framework for Identifiability in Genomics ResearchR01HG006844 · NHGRI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MALIN, BRADLEY A. · 2012 to 2019
$2.4M
NHGRI NIH HHS R01 HG006844NHGRI NIH HHS RM1 HG009034NHGRI NIH HHS U01 HG006378NHGRI NIH HHS U01 HG006385NHGRI NIH HHS U01 HG008701
6 · The paper itself

Abstract

As the quantity and detail of association studies between clinical phenotypes and genotypes grows, there is a push to make summary statistics widely available. Genome wide summary statistics have been shown to be vulnerable to the inference of a targeted individual's presence. In this paper, we show that presence attacks are feasible with phenome wide summary statistics as well. We use data from three healthcare organizations and an online resource that publishes summary statistics. We introduce a novel attack that achieves over 80% recall and precision within a population of 16,346, where 8,173 individuals are targets. However, the feasibility of the attack is dependent on the attacker's knowledge about 1) the targeted individual and 2) the reference dataset. Within a population of over 2 million, where 8,173 individuals are targets, our attack achieves 31% recall and 17% precision. As a result, it is plausible that sharing of phenomic summary statistics may be accomplished with an acceptable level of privacy risk.

Indexed as

Computer SecurityPersonally Identifiable InformationPhenotypeGenome-Wide Association StudyGenotypeHumans

Identifiers

PMID30815118
PMCPMC6371366

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.