ArticleScientific reports2019
Analysis of Differentially Expressed Genes in Tissues of Camellia sinensis during Dedifferentiation and Root Redifferentiation.
Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed.
- Integrative analysis of endogenous phytohormones and transcriptomics reveals mechanism of light-induced callus formation in tea (Camellia sinensis) cuttings.BMC plant biology · 2026Article
- Integrated Transcriptomic and Metabolomic Analyses Shed Light on the Regulation of Aromatic Amino Acid Biosynthesis in a Novel Albino Tea (Current issues in molecular biology · 2025Article
- Transcriptome Reveals the Regulation of Exogenous Auxin Inducing Rooting of Non-Rooting Callus of Tea Cuttings.International journal of molecular sciences · 2024Article
- Transcriptomic profiling and discovery of key transcription factors involved in adventitious roots formation from root cuttings of mulberry.BMC genomics · 2024Article
- Integrated metabolomics and transcriptomics analysis highlight key pathways involved in the somatic embryogenesis of Darjeeling tea.BMC genomics · 2024Article
- Regulatory roles of noncoding RNAs in callus induction and plant cell dedifferentiation.Plant cell reports · 2023Review
- Transcriptomics Analysis Reveals a Putative Role for Hormone Signaling and MADS-Box Genes in Mature Chestnut Shoots Rooting Recalcitrance.Plants (Basel, Switzerland) · 2022Article
- Phytohormones: plant switchers in developmental and growth stages in potato.Journal, genetic engineering & biotechnology · 2021Review
- Protuberances are organized distinct regions of long-term callus: histological and transcriptomic analyses in kiwifruit.Plant cell reports · 2021Article
- The Effect of Sodium Butyrate on Adventitious Shoot Formation Varies among the Plant Species and the Explant Types.International journal of molecular sciences · 2020Article
- MicroRNAs and their targeted genes associated with phase changes of stem explants during tissue culture of tea plant.Scientific reports · 2019Article
- Establishing a System for Functional Characterization of Full-Length cDNAs of Camellia sinensis.International journal of molecular sciences · 2019Article
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Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Tissue culture is very important for identifying the gene function of Camellia sinensis (L.) and exploiting novel germplasm through transgenic technology. Regeneration system of tea plant has been explored but not been well established since the molecular mechanism of tea plant regeneration is not clear yet. In this study, transcriptomic analysis was performed in the initial explants of tea plant and their dedifferentiated and redifferentiated tissues. A total of 93,607 unigenes were obtained through de novo assembly, and 7,193 differentially expressed genes (DEGs) were screened out from the 42,417 annotated unigenes. Much more DEGs were observed during phase transition rather than at growth stages of callus. Our KOG and KEGG analysis, and qPCR results confirmed that phase transition of tea plant was closely related to the mechanism that regulate expression of genes encoding the auxin- and cytokinin-responsive proteins, transcription factor MYB15 and ethylene-responsive transcription factor ERF RAP2-12. These findings provide a reliable foundation for elucidating the mechanism of the phase transition and may help to optimize the regeneration system by regulating the gene expression pattern.
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