Evidence map›Paper›PMID 30814529›Full record

ArticleNature communications2019

Tightly-orchestrated rearrangements govern catalytic center assembly of the ribosome.

Yi Zhou, Sharmishtha Musalgaonkar, Arlen W Johnson, David W Taylor

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 1 synthesis or guideline pooled it, 69 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Structure of a Gcn2 dimer in complex with the large 60S ribosomal subunit.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Yi ZhouDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX, 78712, USA.ORCID http://orcid.org/0000-0002-1650-4591
Sharmishtha MusalgaonkarDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX, 78712, USA.
Arlen W JohnsonDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX, 78712, USA. arlen@austin.utexas.edu.
David W TaylorDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX, 78712, USA.ORCID http://orcid.org/0000-0002-6198-1194
The University of Texas at Austin · USLivestrong Foundation · US

Funding

Eukaryotic Ribosome AssemblyR35GM127127 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI Arlen W JOHNSON · 2018 to 2026
$5.6M
MRNA DEGRADATION AND TRANSLATION CONTROL IN YEASTR01GM053655 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI JOHNSON, ARLEN W · 1995 to 2017
$5.1M
NIGMS NIH HHS R01 GM053655NIGMS NIH HHS R35 GM127127NIH HHS GM127127NIH HHS GM53655
6 · The paper itself

Abstract

The catalytic activity of the ribosome is mediated by RNA, yet proteins are essential for the function of the peptidyl transferase center (PTC). In eukaryotes, final assembly of the PTC occurs in the cytoplasm by insertion of the ribosomal protein Rpl10 (uL16). We determine structures of six intermediates in late nuclear and cytoplasmic maturation of the large subunit that reveal a tightly-choreographed sequence of protein and RNA rearrangements controlling the insertion of Rpl10. We also determine the structure of the biogenesis factor Yvh1 and show how it promotes assembly of the P stalk, a critical element for recruitment of GTPases that drive translation. Together, our structures provide a blueprint for final assembly of a functional ribosome.

Indexed as

Cryoelectron MicroscopyDual-Specificity PhosphatasesModels, MolecularNucleic Acid ConformationPeptidyl TransferasesProtein ConformationRibosomal ProteinsRibosomesRibosome Subunits, Large, EukaryoticRNA-Binding ProteinsRNA, FungalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDual-Specificity PhosphatasesMRT4 protein, S cerevisiaeNMD3 protein, S cerevisiaePeptidyl TransferasesRibosomal ProteinsRNA-Binding ProteinsRNA, FungalRPL10 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsYVH1 protein, S cerevisiae

Identifiers

PMID30814529
PMCPMC6393466
OpenAlexW2895950820

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.