ArticleInternational journal of molecular sciences2019
Transcriptional Dynamics of Grain Development in Barley (
Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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Who cites it
20 citing papers in PubMed, 41 citations in OpenAlex.
- bZIP Transcription Factor PobZIP8 Positively Mediates Heat Stress Tolerance and Negatively Regulates the Growth and Development of Pleurotus ostreatus.Microbial biotechnology · 2026Article
- Transcriptional networks shaping malting quality in barley: From grain development to brewing performance.Food chemistry. Molecular sciences · 2026Review
- Integrated Metabolomics and Proteomics Analyses of the Grain-Filling Process and Differences in the Quality of Tibetan Hulless Barleys.Plants (Basel, Switzerland) · 2025Article
- Classification and prediction of drought and salinity stress tolerance in barley using GenPhenML.Scientific reports · 2024Article
- The transcriptome landscape of developing barley seeds.The Plant cell · 2024Article
- Transcriptome Landscape Analyses of the Regulatory Network for Zygotic Embryo Development inInternational journal of molecular sciences · 2023Article
- Identification of the genes associated with β-glucan synthesis and accumulation during grain development in barley.Food chemistry. Molecular sciences · 2022Article
- Article
- Integrative metabolomic and transcriptomic analyses reveal the mechanisms of Tibetan hulless barley grain coloration.Frontiers in plant science · 2022Article
- Article
- Dynamic transcriptome analysis suggests the key genes regulating seed development and filling in Tartary buckwheat (Frontiers in genetics · 2022Article
- Article
- Genome-Wide Identification of Barley Long Noncoding RNAs and Analysis of Their Regulatory Interactions during Shoot and Grain Development.International journal of molecular sciences · 2021Article
- EORNA, a barley gene and transcript abundance database.Scientific data · 2021Article
- Genome Wide Analysis of the Transcriptional Profiles in Different Regions of the Developing Rice Grains.Rice (New York, N.Y.) · 2020Article
- Heritable temporal gene expression patterns correlate with metabolomic seed content in developing hexaploid oat seed.Plant biotechnology journal · 2020Article
- The Impact of Zinc Oxide Nanoparticles on Cytotoxicity, Genotoxicity, and miRNA Expression in Barley (TheScientificWorldJournal · 2020Article
- Harnessing Transcription Factors as Potential Tools to Enhance Grain Size Under Stressful Abiotic Conditions in Cereal Crops.Frontiers in plant science · 2020Review
- Transcriptome Analysis Reveals Key Seed-Development Genes in Common Buckwheat (International journal of molecular sciences · 2019Article
- Editorial for Special Issue "Molecular Advances in Wheat and Barley".International journal of molecular sciences · 2019Article
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Authors and funding
9 authors at 2 institutions in 1 country.
Funding
Abstract
Grain development, as a vital process in the crop's life cycle, is crucial for determining crop quality and yield. However, the molecular basis and regulatory network of barley grain development is not well understood at present. Here, we investigated the transcriptional dynamics of barley grain development through RNA sequencing at four developmental phases, including early prestorage phase (3 days post anthesis (DPA)), late prestorage or transition phase (8 DPA), early storage phase (13 DPA), and levels off stages (18 DPA). Transcriptome profiling found that pronounced shifts occurred in the abundance of transcripts involved in both primary and secondary metabolism during grain development. The transcripts' activity was decreased during maturation while the largest divergence was observed between the transitions from prestorage phase to storage phase, which coincided with the physiological changes. Furthermore, the transcription factors, hormone signal transduction-related as well as sugar-metabolism-related genes, were found to play a crucial role in barley grain development. Finally, 4771 RNA editing events were identified in these four development stages, and most of the RNA editing genes were preferentially expressed at the prestore stage rather than in the store stage, which was significantly enriched in "essential" genes and plant hormone signal transduction pathway. These results suggested that RNA editing might act as a 'regulator' to control grain development. This study systematically dissected the gene expression atlas of barley grain development through transcriptome analysis, which not only provided the potential targets for further functional studies, but also provided insights into the dynamics of gene regulation underlying grain development in barley and beyond.
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