Evidence map›Paper›PMID 30811544›Full record

ArticleInvestigative ophthalmology & visual science2019

Effect of Trinucleotide Repeat Expansion on the Expression of TCF4 mRNA in Fuchs' Endothelial Corneal Dystrophy.

Naoki Okumura, Ryosuke Hayashi, Masakazu Nakano, Kengo Yoshii, Kei Tashiro, Takahiko Sato, Derek J Blake, Ross Aleff, Malinda Butz, Edward W Highsmith and 9 more

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 30 citations in OpenAlex.

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  14. Lower Fractions ofGenes · 2021
    Article
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  16. Diseases of the corneal endothelium.Experimental eye research · 2021
    Review
  17. Review
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  19. Collagen Remodeling Plays a Pivotal Role in Endothelial Corneal Dystrophies.Investigative ophthalmology & visual science · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 4 countries.

Naoki OkumuraDepartment of Biomedical Engineering, Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe, Japan.
Ryosuke HayashiDepartment of Biomedical Engineering, Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe, Japan.
Masakazu NakanoDepartment of Genomic Medical Sciences, Kyoto Prefectural University of Medicine, Kyoto, Japan.
Kengo YoshiiDepartment of Mathematics and Statistics in Medical Sciences, Kyoto Prefectural University of Medicine, Kyoto, Japan.
Kei TashiroDepartment of Genomic Medical Sciences, Kyoto Prefectural University of Medicine, Kyoto, Japan.
Takahiko SatoDepartment of Ophthalmology, Kyoto Prefectural University of Medicine, Kyoto, Japan.
Derek J BlakeDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, United Kingdom.
Ross AleffDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota, United States.
Malinda ButzDepartment of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, United States.
Edward W HighsmithDepartment of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, United States.
Eric D WiebenDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota, United States.
Michael P FautschDepartment of Ophthalmology, Mayo Clinic, Rochester, Minnesota, United States.
Keith H BaratzDepartment of Ophthalmology, Mayo Clinic, Rochester, Minnesota, United States.
Yuya KomoriDepartment of Biomedical Engineering, Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe, Japan.
Makiko NakaharaDepartment of Biomedical Engineering, Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe, Japan.
Theofilos TourtasDepartment of Ophthalmology, University of Erlangen-Nürnberg, Erlangen, Germany.
Ursula Schlötzer-SchrehardtDepartment of Ophthalmology, University of Erlangen-Nürnberg, Erlangen, Germany.
Friedrich KruseDepartment of Ophthalmology, University of Erlangen-Nürnberg, Erlangen, Germany.
Noriko KoizumiDepartment of Biomedical Engineering, Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe, Japan.
Mayo Clinic · USDoshisha University · JPKyoto Prefectural University of Medicine · JPFriedrich-Alexander-Universität Erlangen-Nürnberg · DECardiff University · GB

Funding

Pathogenesis of age-related Fuchs Endothelial Corneal DystrophyR01EY026490 · NEI · MAYO CLINIC ROCHESTER · PI FAUTSCH, MICHAEL P., GOTTESFELD, JOEL M. · 2016 to 2019
$2.0M
Medical Research Council MR/L010305/1NEI NIH HHS R01 EY026490
6 · The paper itself

Abstract

Purpose: CTG trinucleotide repeat (TNR) expansion is frequently found in transcription factor 4 (TCF4) in Fuchs' endothelial corneal dystrophy (FECD), though the effect of TNR expansion on FECD pathophysiology remains unclear. The purpose of this study was to evaluate the effect of TNR expansion on TCF4 expression in corneal endothelium of patients with FECD. Methods: Peripheral blood DNA and Descemet membrane with corneal endothelium were obtained from 203 German patients with FECD. The CTG TNR repeat length in TCF4 was determined by short tandem repeat (STR) assays and Southern blotting using genomic DNA. Genotyping of rs613872 in TCF4 was performed by PCR. TCF4 mRNA levels in corneal endothelium were evaluated by quantitative PCR using three different probes. Control corneal endothelial samples were obtained from 35 non-FECD subjects. Results: The STR assay and Southern blotting showed that 162 of the 203 patients with FECD (80%) harbored CTG trinucleotide repeat lengths larger than 50. Quantitative PCR using all three probes demonstrated that TCF4 mRNA is significantly upregulated in the corneal endothelium of patients with FECD, regardless of the presence of TNR expansion. However, the length of the TNR tended to show a positive correlation with TCF4 expression level. No correlation was shown between the genotype of TCF4 SNP, rs613872, and the level of TCF4 expression. Conclusions: Our findings showed that TCF4 mRNA is upregulated in the corneal endothelium of patients with FECD. Further studies on the effects of TCF4 upregulation on corneal endothelial cell function will aid in understanding the pathophysiology of FECD.

Indexed as

Trinucleotide Repeat ExpansionAdultAgedAged, 80 and overBlotting, SouthernFemaleFuchs' Endothelial DystrophyGene Expression RegulationGenotyping TechniquesHumansMaleMicrosatellite RepeatsMiddle AgedReal-Time Polymerase Chain ReactionRNA, MessengerTranscription Factor 4RNA, MessengerTCF4 protein, humanTranscription Factor 4

Identifiers

PMID30811544
PMCPMC6392475
OpenAlexW2917680273

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.