Evidence map›Paper›PMID 30811383›Full record

ArticlePLoS genetics2019

Activation-induced deaminase (AID) localizes to the nucleus in brief pulses.

Quy Le, Nancy Maizels

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Quy LeMolecular and Cellular Biology Program, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0002-0628-058X
Nancy MaizelsMolecular and Cellular Biology Program, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0003-0923-4279
University of Washington · US

Funding

MECHANISMS OF SOMATIC MUTATION OF IMMUNOGLOBULIN GENESR01GM041712 · NIGMS · YALE UNIVERSITY · PI MAIZELS, NANCY · 1990 to 2011
$3.4M
Genomic Instability at DNA NicksR01CA183967 · NCI · UNIVERSITY OF WASHINGTON · PI MAIZELS, NANCY · 2014 to 2018
$1.6M
NCI NIH HHS R01 CA183967NIGMS NIH HHS R01 GM041712
6 · The paper itself

Abstract

Activation-induced deaminase (AID) converts C to U and 5-methyl-C to T. These mutagenic activities are critical to immunoglobulin (Ig) gene diversification and epigenetic reprogramming, but they must be tightly controlled to prevent compromising cell fitness. AID acts in the nucleus but localizes predominately to the cytoplasm. To address this apparent paradox, we have carried out time-lapse imaging of AID in single living B cells and fibroblasts. We demonstrate that AID enters the nucleus in brief (30 min) pulses, evident in about 10% of cells in the course of a single cell cycle (24 hr imaging). Pulses do not depend on AID catalytic activity, but they are coordinated with nuclear accumulation of P53. Pulsing may protect cells from pathologic consequences of excess exposure to AID, or enable AID to synchronize its activity with transcription of genes that are AID targets or with nuclear entry of factors that act at sites of AID-catalyzed DNA deamination to promote Ig gene diversification or epigenetic reprogramming.

Indexed as

AICDA (Activation-Induced Cytidine Deaminase)B-LymphocytesCell LineCell NucleusCytidine DeaminaseCytoplasmEpigenesis, GeneticFibroblastsGenetic VariationHumansImmunoglobulinsMicroscopy, FluorescenceProtein TransportSingle-Cell AnalysisTime-Lapse ImagingTumor Suppressor Protein p53AICDA (Activation-Induced Cytidine Deaminase)Cytidine DeaminaseImmunoglobulinsTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID30811383
PMCPMC6411215
OpenAlexW2916416427

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.