Evidence map›Paper›PMID 30809867›Full record

ArticleJournal of clinical laboratory analysis2019

Next-generation sequencing improves molecular epidemiological characterization of thalassemia in Chenzhou Region, P.R. China.

Haoqing Zhang, Caiyun Li, Jianbiao Li, Shuai Hou, Danjing Chen, Haiying Yan, Shiping Chen, Saijun Liu, Zhenzhen Yin, Xiaoqin Yang and 8 more

Open access · goldAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
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  9. Global Globin Network and adopting genomic variant database requirements for thalassemia.Database : the journal of biological databases and curation · 2024
    Article
  10. Article
  11. Detection of 13 Novel Variants and Investigation of Mutation Distribution by Next Generation Sequencing in Hemoglobinopathies: A Single Center Experience.Indian journal of hematology & blood transfusion : an official journal of Indian Society of Hematology and Blood Transfusion · 2024
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  12. Article
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  16. Molecular Basis and Genetic Modifiers of Thalassemia.Hematology/oncology clinics of North America · 2023
    Review
  17. Article
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  19. Characterization of a novel HBB:c.194dup variant of theThe Journal of international medical research · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 2 institutions in 1 country.

Haoqing ZhangCenter of Prenatal Diagnosis, Chenzhou No. 1 People's Hospital, Chenzhou, China.
Caiyun LiCenter of Prenatal Diagnosis, Chenzhou No. 1 People's Hospital, Chenzhou, China.
Jianbiao LiBGI-Shenzhen, Shenzhen, China.
Shuai HouCenter of Prenatal Diagnosis, Chenzhou No. 1 People's Hospital, Chenzhou, China.
Danjing ChenCenter of Prenatal Diagnosis, Chenzhou No. 1 People's Hospital, Chenzhou, China.
Haiying YanCenter of Prenatal Diagnosis, Chenzhou No. 1 People's Hospital, Chenzhou, China.
Shiping ChenBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Saijun LiuBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Zhenzhen YinBGI-Shenzhen, Shenzhen, China.
Xiaoqin YangBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Jufang TanCenter of Prenatal Diagnosis, Chenzhou No. 1 People's Hospital, Chenzhou, China.
Xiaoyan HuangBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Liming ZhangBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Junbin FangBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Caifen ZhangBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Wei LiBGI Genomics, BGI-Shenzhen, Shenzhen, China.
Jian GuoBGI-Shenzhen, Shenzhen, China.
Dongzhu LeiCenter of Prenatal Diagnosis, Chenzhou No. 1 People's Hospital, Chenzhou, China.ORCID https://orcid.org/0000-0002-3330-5586
BGI Group (China) · CNChenzhou First People's Hospital · CN

Funding

ChenZhou Municipal Science And Technology Bureau CZ2014012ChenZhou Municipal Science And Technology Bureau CZKJ2016037Shenzhen Municipal Government of China KJYY20170412153606214
6 · The paper itself

Abstract

objectivesThalassemia is a highly prevalent monogenic inherited disease in southern China. It is important to collect epidemiological data comprehensively for proper prevention and treatment.

methodsIn this study, blood samples collected from 15 807 residents of Chenzhou were primarily screened by hematological tests. A total of 3973 samples of suspected thalassemia carriers were further characterized by combined next-generation sequencing (NGS) and Gap-PCR.

resultsIn total, 1704 subjects were diagnosed as thalassemia carriers with a total prevalence rate of 10.78%, including 943 α-thalassemia carriers, 708 β-thalassemia carriers, and 53 composite α and β-thalassemia carriers. The prevalence rates of α-thalassemia, β-thalassemia, and composite α and β-thalassemia were 5.97%, 4.48%, and 0.34%, respectively. Meanwhile, we characterized 19 α-thalassemia variations and 21 β-thalassemia variations in thalassemia carriers. Approximately 2.88% of thalassemia carriers would be missed by traditional genetic analysis. In addition, four novel thalassemia mutations and one novel abnormal hemoglobin mutation were identified.

conclusionsOur data suggest a high prevalence of thalassemia and a diverse spectrum of thalassemia-associated variations in Chenzhou. Also, combined NGS and Gap-PCR is an effective thalassemia screening method. Our findings might be helpful for prevention and treatment of thalassemia in this region.

Indexed as

AdolescentAdultalpha-Thalassemiabeta-ThalassemiaChildChild, PreschoolChinaFemaleGenetic Carrier ScreeningHemoglobins, AbnormalHigh-Throughput Nucleotide SequencingHumansInfantMaleMiddle AgedMolecular EpidemiologyHemoglobins, Abnormalmutationnext-generation sequencingprevalencethalassemiavariant

Identifiers

PMID30809867
PMCPMC6528559
OpenAlexW2917917113

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.