Evidence map›Paper›PMID 30808712›Full record

ArticleThe Journal of biological chemistry2019

Identification of residues critical for topology inversion of the transmembrane protein TM4SF20 through regulated alternative translocation.

Jingcheng Wang, Lisa N Kinch, Bray Denard, Ching-En Lee, Elina Esmaeilzadeh Gharehdaghi, Nick Grishin, Jin Ye

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Jingcheng WangFrom the Department of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, Texas 75390.
Lisa N KinchDepartments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, Dallas, Texas 75390; Howard Hughes Medical Institute, University of Texas Southwestern Medical Center, Dallas, Texas 75390.
Bray DenardFrom the Department of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, Texas 75390.
Ching-En LeeFrom the Department of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, Texas 75390.
Elina Esmaeilzadeh GharehdaghiFrom the Department of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, Texas 75390.
Nick GrishinDepartments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, Dallas, Texas 75390; Howard Hughes Medical Institute, University of Texas Southwestern Medical Center, Dallas, Texas 75390.
Jin YeFrom the Department of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, Texas 75390. Electronic address: Jin.Ye@UTSouthwestern.edu.
The University of Texas Southwestern Medical Center · USHoward Hughes Medical Institute · USSouthwestern Medical Center · US

Funding

TRANSCRIPTIONAL REGULATION OF LDL RECEPTOR PROMOTERP01HL020948 · NHLBI · UT SOUTHWESTERN MEDICAL CENTER · PI GOLDSTEIN, JOSEPH L · 1985 to 2021
$103.1M
Proteolytic activation of CREB3L1 in treating cancers and tissue fibrosisR01GM116106 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI YE, JIN · 2015 to 2018
$1.6M
Computational analysis of proteinsR35GM127390 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI GRISHIN, NICK V. · 2018 to 2022
$1.5M
NHLBI NIH HHS P01 HL020948NIGMS NIH HHS R01 GM116106NIGMS NIH HHS R35 GM127390
6 · The paper itself

Abstract

Adopting a proper topology is crucial for transmembrane proteins to perform their functions. We previously reported that ceramide regulates a transmembrane protein called TM4SF20 (transmembrane 4 L six family member 20) through topological inversion by altering the direction through which the protein is translocated across membranes during translation. This regulatory mechanism, denoted regulated alternative translocation (RAT), depends on a G

Indexed as

TetraspaninsA549 CellsAmino Acid MotifsAmino Acid SubstitutionHumansMembrane GlycoproteinsMutagenesis, Site-DirectedMutation, MissenseProtein TransportRecombinant Fusion ProteinsMembrane GlycoproteinsRecombinant Fusion ProteinsTetraspaninsTM4SF20 protein, humanTM4SF4 protein, humanceramidemembrane proteinprotein chimeraprotein translocationTM4SF20Topologytransmembrane domain

Identifiers

PMID30808712
PMCPMC6463703
OpenAlexW2916652146

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.