Evidence map›Paper›PMID 30806643›Full record

ArticleScientific data2019

Brain-wide distribution of reporter expression in five transgenic tetracycline-transactivator mouse lines.

Sveinung Lillehaug, Michael J Yetman, Maja A Puchades, Martyna M Checinska, Heidi Kleven, Joanna L Jankowsky, Jan G Bjaalie, Trygve B Leergaard

Abstract readDataset
In one paragraph

Article in Scientific data, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sveinung LillehaugDepartment of Molecular Medicine, Institute of Basic Medical Sciences, University of Oslo, Oslo, Norway.
Michael J YetmanDepartment of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
Maja A PuchadesDepartment of Molecular Medicine, Institute of Basic Medical Sciences, University of Oslo, Oslo, Norway.
Martyna M ChecinskaDepartment of Molecular Medicine, Institute of Basic Medical Sciences, University of Oslo, Oslo, Norway.
Heidi KlevenDepartment of Molecular Medicine, Institute of Basic Medical Sciences, University of Oslo, Oslo, Norway.
Joanna L JankowskyDepartment of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
Jan G BjaalieDepartment of Molecular Medicine, Institute of Basic Medical Sciences, University of Oslo, Oslo, Norway.
Trygve B LeergaardDepartment of Molecular Medicine, Institute of Basic Medical Sciences, University of Oslo, Oslo, Norway.

Funding

CELL &MOLECULAR BIOLOGY OF AGINGT32AG000183 · NIA · BAYLOR COLLEGE OF MEDICINE · PI DONEHOWER, LAWRENCE A. · 1989 to 2015
$3.7M
Selective neuronal silencing to study cognitive decline in Alzheimer's diseaseDP2OD001734 · OD · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI JANKOWSKY, JOANNA L · 2007 to 2010
$2.4M
Deconstructing the pathogenic effect of APP in memory circuitsR01NS092615 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI JANKOWSKY, JOANNA L · 2015 to 2018
$1.9M
NIA NIH HHS T32 AG000183NIH HHS DP2 OD001734NINDS NIH HHS R01 NS092615
6 · The paper itself

Abstract

The spatial pattern of transgene expression in tetracycline-controlled mouse models is governed primarily by the driver line used to introduce the tetracycline-controlled transactivator (tTA). Detailed maps showing where each tTA driver activates expression are therefore essential for designing and using tet-regulated models, particularly in brain research where cell type and regional specificity determine the circuits affected by conditional gene expression. We have compiled a comprehensive online repository of serial microscopic images showing brain-wide reporter expression for five commonly used tTA driver lines. We have spatially registered all images to a common three-dimensional mouse brain anatomical reference atlas for direct comparison of spatial distribution across lines. The high-resolution images and associated metadata are shared via the web page of the EU Human Brain Project. Images can be inspected using an interactive viewing tool that includes an optional overlay feature providing anatomical delineations and reference atlas coordinates. Interactive viewing is supplemented by semi-quantitative analyses of expression levels within anatomical subregions for each tTA driver line.

Indexed as

Gene Expression RegulationGenes, ReporterMice, TransgenicAnimalsBrain MappingImaging, Three-DimensionalMicePromoter Regions, GeneticTetracyclineTrans-ActivatorsTetracyclineTrans-Activators

Identifiers

PMID30806643
PMCPMC6390708

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.