Evidence map›Paper›PMID 30804216›Full record

ArticleThe Journal of biological chemistry2019

A synthetic non-histone substrate to study substrate targeting by the Gcn5 HAT and sirtuin HDACs.

Anthony Rössl, Alix Denoncourt, Mong-Shang Lin, Michael Downey

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Deletion ofFrontiers in microbiology · 2022
    Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Anthony RösslFrom the Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario K1H 8M5, Canada.
Alix DenoncourtFrom the Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario K1H 8M5, Canada.
Mong-Shang LinBioLegend, San Diego, California 92121.
Michael DowneyFrom the Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario K1H 8M5, Canada, mdowne2@uottawa.ca.
Ottawa Institute of Systems BiologyBioLegend (United States) · USUniversity of Ottawa · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gcn5 and sirtuins are highly conserved histone acetyltransferase (HAT) and histone deacetylase (HDAC) enzymes that were first characterized as regulators of gene expression. Although histone tails are important substrates of these enzymes, they also target many nonhistone proteins that function in diverse biological processes. However, the mechanisms used by these enzymes to choose their nonhistone substrates are unknown. Previously, we used SILAC-based MS to identify novel nonhistone substrates of Gcn5 and sirtuins in yeast and found a shared target consensus sequence. Here, we use a synthetic biology approach to demonstrate that this consensus sequence can direct acetylation and deacetylation targeting by these enzymes

Indexed as

Histone AcetyltransferasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSirtuinsAcetylationGene Deletionp300-CBP-Associated FactorSubstrate SpecificityTranscription FactorsADA2 protein, S cerevisiaeGCN5 protein, S cerevisiaeHistone AcetyltransferasesNGG1 protein, S cerevisiaep300-CBP-Associated FactorSaccharomyces cerevisiae ProteinsSirtuinsTranscription Factorsacetylationfusion proteinGcn5SAGAsirtuinsynthetic biologytranscription coactivatoryeast

Identifiers

PMID30804216
PMCPMC6484106
OpenAlexW2916749940

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.