Evidence map›Paper›PMID 30804042›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2019

NKAP Must Associate with HDAC3 to Regulate Hematopoietic Stem Cell Maintenance and Survival.

Michael Jeremy Shapiro, Michael Jonathan Lehrke, Ji Young Chung, Sinibaldo Romero Arocha, Virginia Smith Shapiro

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Michael Jeremy ShapiroDepartment of Immunology, Mayo Clinic, Rochester, MN 55905.ORCID 0000-0003-0037-0848
Michael Jonathan LehrkeDepartment of Immunology, Mayo Clinic, Rochester, MN 55905.
Ji Young ChungDepartment of Immunology, Mayo Clinic, Rochester, MN 55905.
Sinibaldo Romero ArochaDepartment of Immunology, Mayo Clinic, Rochester, MN 55905.
Virginia Smith ShapiroDepartment of Immunology, Mayo Clinic, Rochester, MN 55905 shapiro.virginia1@mayo.edu.ORCID 0000-0001-9978-341X
Mayo Clinic in Arizona · US

Funding

Regulation of T cell maturationR01AI083279 · NIAID · MAYO CLINIC ROCHESTER · PI SHAPIRO, VIRGINIA SMITH · 2010 to 2019
$3.8M
PHD TRAINING PROGRAM IN BASIC IMMUNOLOGYT32AI007425 · NIAID · MAYO CLINIC ROCHESTER · PI SHAPIRO, VIRGINIA SMITH · 1995 to 2020
$3.6M
Regulation of hematopoietic stem cell maintenance and survival by NKAPR01HL114343 · NHLBI · MAYO CLINIC ROCHESTER · PI SHAPIRO, VIRGINIA SMITH · 2013 to 2016
$1.6M
NHLBI NIH HHS R01 HL114343NIAID NIH HHS R01 AI083279NIAID NIH HHS T32 AI007425
6 · The paper itself

Abstract

NKAP is a multifunctional nuclear protein that associates with the histone deacetylase HDAC3. Although both NKAP and HDAC3 are critical for hematopoietic stem cell (HSC) maintenance and survival, it was not known whether these two proteins work together. To assess the importance of their association in vivo, serial truncation and alanine scanning was performed on NKAP to identify the minimal binding site for HDAC3. Mutation of either Y352 or F347 to alanine abrogated the association of NKAP with HDAC3, but did not alter NKAP localization or expression. Using a linked conditional deletion/re-expression system in vivo, we demonstrated that re-expression of the Y352A NKAP mutant failed to restore HSC maintenance and survival in mice when endogenous NKAP expression was eliminated using Mx1-cre and poly-IC, whereas re-expression of wild type NKAP maintained the HSC pool. However, Y352A NKAP did restore proliferation in murine embryonic fibroblasts when endogenous NKAP expression was eliminated using ER-cre and tamoxifen. Therefore, Y352 in NKAP is critical for association with HDAC3 and for HSC maintenance and survival but is not important for proliferation of murine embryonic fibroblasts, demonstrating that NKAP functions in different complexes in different cell types.

Indexed as

Amino Acid SubstitutionAnimalsCell SurvivalEmbryo, MammalianFibroblastsHEK293 CellsHematopoietic Stem CellsHistone Deacetylase 3Histone DeacetylasesHumansMiceMice, TransgenicMutation, MissenseRepressor ProteinsHistone Deacetylase 3Histone DeacetylasesNKAP protein, mouseRepressor Proteins

Identifiers

PMID30804042
PMCPMC6456368
OpenAlexW2915775329

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.