Evidence map›Paper›PMID 30803986›Full record

ArticleJournal of medical genetics2019

Distal chromosome 16p11.2 duplications containing

Brooke Sadler, Gabe Haller, Lilian Antunes, Xavier Bledsoe, Jose Morcuende, Philip Giampietro, Cathleen Raggio, Nancy Miller, Yared Kidane, Carol A Wise and 11 more

Open access · greenAbstract read
In one paragraph

Article in Journal of medical genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Rare missense variants inJournal of medical genetics · 2025
    Article
  4. Article
  5. TBX6 as a cause of a combined skeletal-kidney dysplasia syndrome.American journal of medical genetics. Part A · 2022
    Article
  6. Diagnostic yield of exome sequencing in congenital vertical talus.European journal of medical genetics · 2022
    Article
  7. Article
  8. Article
  9. Rare andJournal of medical genetics · 2020
    Article
  10. The role of 22q11.2 deletion syndrome in the relationship between congenital heart disease and scoliosis.The spine journal : official journal of the North American Spine Society · 2020
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 1 country.

Brooke SadlerDepartment of Neurology, Washington University in Saint Louis School of Medicine, St. Louis, Missouri, USA.ORCID 0000-0002-3268-3809
Gabe HallerDepartment of Orthopedic Surgery, Washington University in Saint Louis School of Medicine, St. Louis, Missouri, USA.
Lilian AntunesDepartment of Neurology, Washington University in Saint Louis School of Medicine, St. Louis, Missouri, USA.
Xavier BledsoeDepartment of Neurology, Washington University in Saint Louis School of Medicine, St. Louis, Missouri, USA.
Jose MorcuendeDepartment of Orthopaedic Surgery and Rehabilitation, University of Iowa Roy J and Lucille A Carver College of Medicine, Iowa City, Iowa, USA.
Philip GiampietroDepartment of Genetics, St. Christopher's Hospital for Children, Philadelphia, Pennsylvania, USA.
Cathleen RaggioOrthopedic Surgery, Pediatrics, Hospital for Special Surgery, New York City, New York, USA.
Nancy MillerDepartment of Orthopedics, University of Colorado at Denver - Anschutz Medical Campus, Aurora, Colorado, USA.
Yared KidaneSarah M. and Charles E. Seay Center for Musculoskeletal Research, Texas Scottish Rite Hospital for Children, Dallas, Texas, USA.
Carol A WiseSarah M. and Charles E. Seay Center for Musculoskeletal Research, Texas Scottish Rite Hospital for Children, Dallas, Texas, USA.
Ina AmarilloDepartment of Pathology and Immunology, Washington University in Saint Louis School of Medicine, St. Louis, Missouri, USA.
Nephi WaltonGenomic Medicine, Geisinger Health System, Danville, Pennsylvania, USA.
Mark SeeleyGenomic Medicine, Geisinger Health System, Danville, Pennsylvania, USA.
Darren JohnsonGenomic Medicine, Geisinger Health System, Danville, Pennsylvania, USA.
Conner JenkinsGenomic Medicine, Geisinger Health System, Danville, Pennsylvania, USA.
Troy JenkinsGenomic Medicine, Geisinger Health System, Danville, Pennsylvania, USA.
Matthew OetjensGenomic Medicine, Geisinger Health System, Danville, Pennsylvania, USA.
R Spencer TongDepartment of Pediatrics, Washington University in Saint Louis School of Medicine, St. Louis, Missouri, USA.
Todd E DruleyDepartment of Pediatrics, Washington University in Saint Louis School of Medicine, St. Louis, Missouri, USA.
Matthew B DobbsDepartment of Orthopedic Surgery, Washington University in Saint Louis School of Medicine, St. Louis, Missouri, USA.
Christina A GurnettDepartment of Neurology, Division of Pediatric Neurology, Washington University in St. Louis School of Medicine, St. Louis, Missouri, USA.
Washington University in St. Louis · USGeisinger Health System · USTexas Scottish Rite Hospital for Children · USHospital for Special Surgery · USSt. Christopher's Hospital for Children · USUniversity of Colorado Anschutz Medical Campus · USUniversity of Iowa · US

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI TIMOTHY J. EBERLEIN · 2001 to 2026
$128.0M
WU INSTITUTE OF CLINICAL AND TRANSLATIONAL SCIENCESUL1TR002345 · NCATS · WASHINGTON UNIVERSITY · PI William G. Powderly · 2017 to 2026
$97.8M
Washington University Institute of Clinical and Translational Sciences (UL1)UL1RR024992 · NCRR · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2007 to 2011
$45.4M
Non-coding/epigenetic regulationP01HD084387 · NICHD · UT SOUTHWESTERN MEDICAL CENTER · PI Nadav Ahituv, LILIANNA SOLNICAKREZEL · 2016 to 2026
$14.2M
Washington University Intellectual and Developmental Disabilities Research Center-Administrative Down Syndrome SupplementU54HD087011 · NICHD · WASHINGTON UNIVERSITY · PI CONSTANTINO, JOHN N. · 2015 to 2019
$7.1M
Genetic Risk Factors for Severe ScoliosisR01AR067715 · NIAMS · WASHINGTON UNIVERSITY · PI DOBBS, MATTHEW BARRETT, GURNETT, CHRISTINA · 2015 to 2024
$6.0M
The Role of the Osteoblast Secretome in Bone FormationP30AR057235 · NIAMS · WASHINGTON UNIVERSITY · PI SILVA, MATTHEW J · 2009 to 2018
$5.7M
HIGH PERFORMANCE BIOMEDICAL IMAGING COMPUTER RESOURCESS10RR022984 · NCRR · WASHINGTON UNIVERSITY · PI PRIOR, FRED WILLIAM · 2009 to 2009
$1.9M
Familial idiopathic scoliosis: gene discovery and functional studiesR01AR068292 · NIAMS · UNIVERSITY OF COLORADO DENVER · PI HADLEY-MILLER, NANCY · 2015 to 2019
$1.7M
GPU COMPUTING RESOURCE TO ENABLE INNOVATION IN IMAGING AND NETWORK BIOLOGYS10OD018091 · OD · WASHINGTON UNIVERSITY · PI PAPPU, ROHIT V, PRIOR, FRED WILLIAM · 2014 to 2014
$598k
NCATS NIH HHS UL1 TR002345NCI NIH HHS P30 CA091842NCRR NIH HHS S10 RR022984NCRR NIH HHS UL1 RR024992NIAMS NIH HHS P30 AR057235NIAMS NIH HHS R01 AR067715NIAMS NIH HHS R01 AR068292NICHD NIH HHS P01 HD084387NICHD NIH HHS U54 HD087011NIH HHS S10 OD018091
6 · The paper itself

Abstract

introductionAdolescent idiopathic scoliosis (AIS) is a common musculoskeletal disorder with strong evidence for a genetic contribution. CNVs play an important role in congenital scoliosis, but their role in idiopathic scoliosis has been largely unexplored.

methodsExome sequence data from 1197 AIS cases and 1664 in-house controls was analysed using coverage data to identify rare CNVs. CNV calls were filtered to include only highly confident CNVs with >10 average reads per region and mean log-ratio of coverage consistent with single-copy duplication or deletion. The frequency of 55 common recurrent CNVs was determined and correlated with clinical characteristics.

resultsDistal chromosome 16p11.2 microduplications containing the gene

conclusionsRecurrent distal chromosome 16p11.2 duplications explain nearly 1% of AIS. Distal chromosome 16p11.2 duplications may contribute to scoliosis pathogenesis by directly impairing growth or by altering expression of nearby genes, such as

Indexed as

Chromosome DuplicationChromosomes, Human, Pair 16Genetic Association StudiesGenetic Predisposition to DiseaseAdaptor Proteins, Signal TransducingCase-Control StudiesChromosome MappingComputational BiologyDNA Copy Number VariationsExome SequencingFemaleHeterozygoteHumansMalePhenotypeScoliosisAdaptor Proteins, Signal TransducingSH2B1 protein, human16p11.2copy-numberscoliosis

Identifiers

PMID30803986
PMCPMC6592771
OpenAlexW2917115790

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.