Evidence map›Paper›PMID 30802492›Full record

ArticleComparative biochemistry and physiology. Part B, Biochemistry & molecular biology2019

Establishment and characterization of an anoxia-tolerant cell line, PSU-AL-WS40NE, derived from an embryo of the annual killifish Austrofundulus limnaeus.

Claire L Riggs, Rosey Le, Dietmar Kültz, Daniel Zajic, Amanda Summers, Luz Alvarez, Jason E Podrabsky

Open access · greenAbstract read
In one paragraph

Article in Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Claire L RiggsDepartment of Biology, Portland State University, P.O. Box 751, Portland, OR 97207, United States of America; Department of Biology, Saint Louis University, 1 N. Grand Blvd., St. Louis, MO 63103, United States of America. Electronic address: claire.riggs@slu.edu.
Rosey LeDepartment of Biology, Portland State University, P.O. Box 751, Portland, OR 97207, United States of America; School of Life Sciences, University of Nevada, Las Vegas, 4505 S. Maryland Pkwy., Las Vegas, NV 89154, United States of America.
Dietmar KültzDepartment of Animal Science, University of California, One Shields Ave., Davis, CA 95616, United States of America.
Daniel ZajicDepartment of Biology, Portland State University, P.O. Box 751, Portland, OR 97207, United States of America.
Amanda SummersDepartment of Biology, Portland State University, P.O. Box 751, Portland, OR 97207, United States of America; Department of Psychological and Brain Sciences, Villanova University, 800 E. Lancaster Ave., Villanova, PA 19085, United States of America.
Luz AlvarezDepartment of Biology, Portland State University, P.O. Box 751, Portland, OR 97207, United States of America.
Jason E PodrabskyDepartment of Biology, Portland State University, P.O. Box 751, Portland, OR 97207, United States of America.
Portland State University · USUniversity of California, Davis · US

Funding

EXITO: Enhancing Cross-disciplinary Infrastructure and Training at OregonUL1GM118964 · NIGMS · PORTLAND STATE UNIVERSITY · PI KELLER, THOMAS E · 2015 to 2023
$18.0M
EXITO: Enhancing Cross-disciplinary Infrastructure and Training at OregonRL5GM118963 · NIGMS · PORTLAND STATE UNIVERSITY · PI KELLER, THOMAS E · 2015 to 2023
$11.9M
EXITO: Enhancing Cross-disciplinary Infrastructure and Training at OregonTL4GM118965 · NIGMS · PORTLAND STATE UNIVERSITY · PI KELLER, THOMAS E · 2015 to 2022
$10.1M
NIGMS NIH HHS RL5 GM118963NIGMS NIH HHS TL4 GM118965NIGMS NIH HHS UL1 GM118964
6 · The paper itself

Abstract

Most animal cells rely on aerobic metabolism for survival and are damaged or die within minutes without oxygen. Embryos of the annual killifish Austrofundulus limnaeus, however, survive months without oxygen. Determining how their cells survive without oxygen has the potential to revolutionize our understanding of the cellular mechanisms supporting vertebrate anoxia tolerance and the evolution of such tolerance. Therefore, we aimed to establish and characterize an anoxia-tolerant cell line from A. limnaeus for investigating mechanisms of vertebrate anoxia tolerance. The PSU-AL-WS40NE cell line of neuroepithelial identity was established from embryonic tissue of A. limnaeus using a tissue explant. The cells can survive for at least 49 d without oxygen or replenishment of growth medium, compared to only 3 d of anoxic survival for two mammalian cell lines. PSU-AL-WS40NE cells accumulate lactate during anoxia, indicating use of common metabolic pathways for anaerobic metabolism. Additionally, they express many of the same small noncoding RNAs that are stress-responsive in whole embryos of A. limnaeus and mammalian cells, as well as anoxia-responsive small noncoding RNAs derived from the mitochondrial genome (mitosRNAs). The establishment of the cell line provides a unique tool for investigating cellular mechanisms of vertebrate anoxia tolerance, and has the potential to transform our understanding of the role of oxidative metabolism in cell biology.

Indexed as

Cell LineAnimalsEmbryo, NonmammalianFundulidaeAnnual killifishAnoxiaCell cultureNoncoding RNA

Identifiers

PMID30802492
PMCPMC7646742
OpenAlexW2916345918

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.