Evidence map›Paper›PMID 30801552›Full record

Observational studyTransplantation2019

Genetic Variants Associated With Immunosuppressant Pharmacokinetics and Adverse Effects in the DeKAF Genomics Genome-wide Association Studies.

William S Oetting, Baolin Wu, David P Schladt, Weihua Guan, Jessica van Setten, Brendan J Keating, David Iklé, Rory P Remmel, Casey R Dorr, Roslyn B Mannon and 4 more

Open access · greenAbstract readMulticenter StudyObservational Study
In one paragraph

Observational study in Transplantation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Variants in mycophenolate and CMV antiviral drug pharmacokinetic and pharmacodynamic genes and leukopenia in heart transplant recipients.The Journal of heart and lung transplantation : the official publication of the International Society for Heart Transplantation · 2021
    Article
  12. Observational
  13. Review
  14. The Clinical Impact of the CFrontiers in pharmacology · 2020
    Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

William S OettingDepartment of Experimental and Clinical Pharmacology, College of Pharmacy, University of Minnesota, Minneapolis, MN.
Baolin WuDepartment of Biostatistics, University of Minnesota, Minneapolis, MN.
David P SchladtHennepin Healthcare Research Institute, Minneapolis, MN.
Weihua GuanDepartment of Biostatistics, University of Minnesota, Minneapolis, MN.
Jessica van SettenDepartment of Cardiology, University Medical Center Utrecht, University of Utrecht, Utrecht, The Netherlands.
Brendan J KeatingPenn Transplant Institute, School of Medicine, University of Pennsylvania, Philadelphia, PA.
David IkléRho, Chapel Hill, NC.
Rory P RemmelDepartment of Medicinal Chemistry, College of Pharmacy, University of Minnesota, Minneapolis, MN.
Casey R DorrHennepin Healthcare Research Institute, Minneapolis, MN.
Roslyn B MannonDivision of Nephrology, University of Alabama, Birmingham, AL.
Arthur J MatasDepartment of Surgery, University of Minnesota, Minneapolis, MN.
Ajay K IsraniHennepin Healthcare Research Institute, Minneapolis, MN.
Pamala A JacobsonDepartment of Experimental and Clinical Pharmacology, College of Pharmacy, University of Minnesota, Minneapolis, MN.
DeKAF Genomics and GEN-03 Investigators
University of Minnesota · USHennepin Healthcare Research Institute · USPediatric Nephrology of Alabama · USRho (United States) · USUtrecht University · NL

Funding

Transplantation GroupUM2AI117870 · NIAID · RHO FEDERAL SYSTEMS DIVISION, INC. · PI DAVID, GLORIA · 2015 to 2023
$208.1M
Pharmacogenomics of Immune Suppressants in Kidney TransplantationU19AI070119 · NIAID · UNIVERSITY OF MINNESOTA · PI MATAS, ARTHUR J · 2006 to 2016
$17.1M
Long-term Deterioration of Kidney Allograft FunctionU01AI058013 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI MATAS, ARTHUR J · 2005 to 2010
$10.2M
Genetic Variants Associated with Tacrolimus Metabolism in Kidney Transplant RecipientsK01AI130409 · NIAID · HENNEPIN HEALTHCARE RESEARCH INSTITUTE · PI DORR, CASEY R · 2018 to 2022
$724k
Molecular and Cellular Analysis of Allograft Loss in Kidney Transplant BiopsiesR21AI171826 · NIAID · HENNEPIN HEALTHCARE RESEARCH INSTITUTE · PI DORR, CASEY R · 2022 to 2023
$406k
NIAID NIH HHS K01 AI130409NIAID NIH HHS R21 AI171826NIAID NIH HHS U01 AI058013NIAID NIH HHS U19 AI070119NIAID NIH HHS UM2 AI117870
6 · The paper itself

Abstract

backgroundThe immunosuppressants tacrolimus and mycophenolate are important components to the success of organ transplantation, but are also associated with adverse effects, such as nephrotoxicity, anemia, leukopenia, and new-onset diabetes after transplantation. In this report, we attempted to identify genetic variants which are associated with these adverse outcomes.

methodsWe performed a genome-wide association study, using a genotyping array tailored specifically for transplantation outcomes containing 722 147 single nucleotide polymorphisms, and 2 cohorts of kidney allograft recipients-a discovery cohort and a confirmation cohort-to identify and then confirm genetic variants associated with immunosuppressant pharmacokinetics and adverse outcomes.

resultsSeveral genetic variants were found to be associated with tacrolimus trough concentrations. We did not confirm variants associated with the other phenotypes tested although several suggestive variants were identified.

conclusionsThese results show that adverse effects associated with tacrolimus and mycophenolate are complex, and recipient risk is not determined by a few genetic variants with large effects with but most likely are due to many variants, each with small effect sizes, and clinical factors.

Indexed as

Kidney TransplantationPharmacogenomic VariantsPolymorphism, Single NucleotideAdultAgedAnemiaDiabetes MellitusFemaleGenome-Wide Association StudyGenotypeGraft RejectionGraft SurvivalHumansImmunosuppressive AgentsKidney DiseasesLeukopeniaImmunosuppressive AgentsMycophenolic AcidTacrolimus

Identifiers

PMID30801552
PMCPMC6597284
OpenAlexW2918317141

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.