Evidence map›Paper›PMID 30800499›Full record

ArticleBiomedical optics express2019

Aperture phase modulation with adaptive optics: a novel approach for speckle reduction and structure extraction in optical coherence tomography.

Pengfei Zhang, Suman K Manna, Eric B Miller, Yifan Jian, Ratheesh K Meleppat, Marinko V Sarunic, Edward N Pugh, Robert J Zawadzki

Abstract read
In one paragraph

Article in Biomedical optics express, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. UnifiedAdvances in optics and photonics · 2021
    Article
  9. Article
  10. Article
  11. Crosstalk-free volumetricBiomedical optics express · 2019
    Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Pengfei ZhangUC Davis Eye-Pod Small Animal Ocular Imaging Laboratory, Department of Cell Biology and Human Anatomy, University of California Davis, 4320 Tupper Hall, Davis, CA 95616, USA.
Suman K MannaUC Davis Eye-Pod Small Animal Ocular Imaging Laboratory, Department of Cell Biology and Human Anatomy, University of California Davis, 4320 Tupper Hall, Davis, CA 95616, USA.
Eric B MillerCenter for Neuroscience, 1544 Newton Court, University of California Davis, Davis, CA 95618, USA.
Yifan JianCasey Eye Institute, Oregon Health & Science University, Portland, OR, 97239, USA.
Ratheesh K MeleppatUC Davis Eye-Pod Small Animal Ocular Imaging Laboratory, Department of Cell Biology and Human Anatomy, University of California Davis, 4320 Tupper Hall, Davis, CA 95616, USA.
Marinko V SarunicSimon Fraser University, School of Engineering Science, 8888 University Drive, Burnaby, British Columbia V5A 1S6, Canada.
Edward N PughUC Davis Eye-Pod Small Animal Ocular Imaging Laboratory, Department of Cell Biology and Human Anatomy, University of California Davis, 4320 Tupper Hall, Davis, CA 95616, USA.
Robert J ZawadzkiUC Davis Eye-Pod Small Animal Ocular Imaging Laboratory, Department of Cell Biology and Human Anatomy, University of California Davis, 4320 Tupper Hall, Davis, CA 95616, USA.

Funding

VISION RESEARCH CORE GRANTP30EY012576 · NEI · UNIVERSITY OF CALIFORNIA DAVIS · PI MARIE E BURNS · 1999 to 2026
$18.9M
MECHANISMS OF VISUAL TRANSDUCTIONR01EY002660 · NEI · UNIVERSITY OF PENNSYLVANIA · PI PUGH, EDWARD N · 1985 to 2021
$11.4M
Vision Science Training Program: Cornea to CortexT32EY015387 · NEI · UNIVERSITY OF CALIFORNIA DAVIS · PI MARIE E BURNS · 2003 to 2026
$4.8M
Theranostics of Photoreceptor-RPE-Choroid Neurovascular Unit in Mouse Models of Eye DiseasesR01EY026556 · NEI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Robert J Zawadzki · 2017 to 2026
$4.1M
NEI NIH HHS P30 EY012576NEI NIH HHS R01 EY002660NEI NIH HHS R01 EY026556NEI NIH HHS T32 EY015387
6 · The paper itself

Abstract

Speckle is an inevitable consequence of the use of coherent light in imaging and acts as noise that corrupts image formation in most applications. Optical coherence tomographic imaging, as a technique employing coherence time gating, suffers from speckle. We present here a novel method of suppressing speckle noise intrinsically compatible with adaptive optics (AO) for confocal coherent imaging: modulation of the phase in the system pupil aperture with a segmented deformable mirror (DM) to introduce minor perturbations in the point spread function. This approach creates uncorrelated speckle patterns in a series of images, enabling averaging to suppress speckle noise while maintaining structural detail. A method is presented that efficiently determines the optimal range of modulation of DM segments relative to their AO-optimized position so that speckle noise is reduced while image resolution and signal strength are preserved. The method is active and independent of sample properties. Its effectiveness and efficiency are quantified and demonstrated by both

Identifiers

PMID30800499
PMCPMC6377907

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.