Evidence map›Paper›PMID 30800139›Full record

ArticleFrontiers in plant science2019

Evaluation of Methods to Assess

Satya Swathi Nadakuduti, Colby G Starker, Dae Kwan Ko, Thilani B Jayakody, C Robin Buell, Daniel F Voytas, David S Douches

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 44 citations in OpenAlex.

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  13. Frontiers in plant science · 2023
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  14. Optimization of cabbage (Frontiers in plant science · 2023
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  15. Article
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  17. Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Satya Swathi NadakudutiDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, United States.
Colby G StarkerDepartment of Genetics, Cell Biology and Development and Center for Precision Plant Genomics, University of Minnesota, Saint Paul, MN, United States.
Dae Kwan KoDepartment of Plant Biology, Michigan State University, East Lansing, MI, United States.
Thilani B JayakodyDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, United States.
C Robin BuellDepartment of Plant Biology, Michigan State University, East Lansing, MI, United States.
Daniel F VoytasDepartment of Genetics, Cell Biology and Development and Center for Precision Plant Genomics, University of Minnesota, Saint Paul, MN, United States.
David S DouchesDepartment of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI, United States.
Michigan State University · USUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome-editing is being implemented in increasing number of plant species using engineered sequence specific nucleases (SSNs) such as Clustered Regularly Interspaced Short Palindromic Repeats/CRISPR-associated systems (CRISPR/Cas9), Transcription activator like effector nucleases (TALENs), and more recently CRISPR/Cas12a. As the tissue culture and regeneration procedures to generate gene-edited events are time consuming, large-scale screening methodologies that rapidly facilitate validation of genome-editing reagents are critical. Plant protoplast cells provide a rapid platform to validate genome-editing reagents. Protoplast transfection with plasmids expressing genome-editing reagents represents an efficient and cost-effective method to screen for

Indexed as

CRISPR/Cas9double-stranded oligodeoxynucleotidesgenome-editingNHEJprotoplastsTALENs

Identifiers

PMID30800139
PMCPMC6376315
OpenAlexW2914580634

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.