Evidence map›Paper›PMID 30799775›Full record

ArticleTechnology in cancer research & treatment2018

Association of Single-Nucleotide Polymorphisms in Monoubiquitinated FANCD2-DNA Damage Repair Pathway Genes With Breast Cancer in the Chinese Population.

Fei-Yu Chen, Hao Wang, Hui Li, Xue-Li Hu, Xu Dai, Shou-Man Wang, Guo-Jiao Yan, Ping-Lan Jiang, Yuan-Ping Hu, Juan Huang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Technology in cancer research & treatment, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Fei-Yu Chen1 Department of Breast Surgery, Xiangya Hospital, Central South University, Changsha, People's Republic of China.ORCID 0000-0002-9643-0739
Hao Wang2 Department of Breast Surgery, Second People's Hospital of Sichuan Province, Chengdu, People's Republic of China.
Hui Li2 Department of Breast Surgery, Second People's Hospital of Sichuan Province, Chengdu, People's Republic of China.
Xue-Li Hu1 Department of Breast Surgery, Xiangya Hospital, Central South University, Changsha, People's Republic of China.
Xu Dai1 Department of Breast Surgery, Xiangya Hospital, Central South University, Changsha, People's Republic of China.
Shou-Man Wang1 Department of Breast Surgery, Xiangya Hospital, Central South University, Changsha, People's Republic of China.
Guo-Jiao Yan1 Department of Breast Surgery, Xiangya Hospital, Central South University, Changsha, People's Republic of China.
Ping-Lan Jiang1 Department of Breast Surgery, Xiangya Hospital, Central South University, Changsha, People's Republic of China.
Yuan-Ping Hu1 Department of Breast Surgery, Xiangya Hospital, Central South University, Changsha, People's Republic of China.
Juan Huang1 Department of Breast Surgery, Xiangya Hospital, Central South University, Changsha, People's Republic of China.
Li-Li Tang1 Department of Breast Surgery, Xiangya Hospital, Central South University, Changsha, People's Republic of China.
Central South University · CNSichuan Cancer Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveThe aim of the study was to estimate breast cancer risk conferred by individual single-nucleotide polymorphisms of breast cancer susceptibility genes.

methodsWe analyzed the 48 tagging single-nucleotide polymorphisms of 8 breast cancer susceptibility genes involved in the monoubiquitinated FANCD2-DNA damage repair pathway in 734 Chinese women with breast cancer and 672 age-matched healthy controls.

resultsForty-five tagging single-nucleotide polymorphisms were successfully genotyped by SNPscan, and the call rates for each tagging single-nucleotide polymorphisms were above 98.9%. We found that 13 tagging single-nucleotide polymorphisms of 5 genes ( Parter and localizer of Breast cancer gene2 ( PALB2), Tumour protein 53 ( TP53), Nijmegen breakage syndrome 1, Phosphatase and tensin homolog deleted from chromosome 10 ( PTEN), and Breast cancer gene 1 ( BRCA1-interacting protein 1)) were significantly associated with breast cancer risk. A total of 5 tagging single-nucleotide polymorphisms (rs2299941 of PTEN, rs2735385, rs6999227, rs1805812, and rs1061302 of Nijmegen breakage syndrome 1) were tightly associated with breast cancer risk in sporadic cases, and 5 other tagging single-nucleotide polymorphisms (rs1042522 of TP53, rs2735343 of PTEN, rs7220719, rs16945628, and rs11871753 of BRCA1-interacting protein 1) were tightly associated with breast cancer risk in familial and early-onset cases.

conclusionsSome of the tagging single-nucleotide polymorphisms of 5 genes ( PALB2, TP53, Nijmegen breakage syndrome 1, PTEN, and BRCA1-interacting protein 1) involved in the monoubiquitinated FANCD2-DNA damage repair pathway were significantly associated with breast cancer risk.

Indexed as

DNA DamageGenetic Predisposition to DiseasePolymorphism, Single NucleotideAllelesAsian PeopleBiomarkers, TumorBreast NeoplasmsCase-Control StudiesChinaFanconi Anemia Complementation Group D2 ProteinFemaleGenotypeHumansOdds RatioRisk AssessmentSignal TransductionBiomarkers, TumorFANCD2 protein, humanFanconi Anemia Complementation Group D2 Proteinbreast cancermonoubiquitinated FANCD2–DNA damage repair pathway genesSNP

Identifiers

PMID30799775
PMCPMC6311543
OpenAlexW2906239769

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.